Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0145 ATGACCACCGGAGGAGGAGGAGGAGGAGGCGGCTCCGCCGTCGGAGTCCAGATCCACCACCAGACCCGAATGGCGCTCCCCGATTTCCTCCAGAGCGTCAATCTCAAGTACGTCAAATTAGGTTACCACTATTTGATCTCCAACCTCTTAACGCTTTTTCTAGTTCCTTTGATCCTCGTCACGCTAATCCAGGTCTCCCAAACCACCGACCTCCACCACCTCTGGCTCCACCTCCAGTACAACCTCCTCACCATCCTCACCTGCTCCGCCGTCCTCGTTTTTGGCCTCACGCTTTACGCCGTCACGCGCCCACGCGCCGTCTACCTCCTGGACTCCGCCTGCTTCCGCCCCGCCGAGCACCTCAAAGCCCCCTTCCGGAGTTTCATGGACCATTCCCGCCTCACGGGAGACTTCGAGGAGTCGTCCCTGGATTTCCAGCGCAAGATCCTGGAACGGTCTGGTCTCGGGGAGGAGACCTACGTCCCCGAGGCCATGCACTCTATTCCGCCGCAGCCGTCGATGGCTGCGGCCAGAGCGGAGGCGGAACAAGTCATGTTTGGTGCCTTGGATAATCTCTTCCACAACACTAGCCTTAAGCCTAAGGATATTGGTATTCTTATTGTGAATTGTAGCTTGTTTAACCCTACGCCCTCGCTCTCTGCCATGATTGTTAATAAGTACAAATTGAGAGGGAACATTAGGAGCTTTAATTTGGGAGGGATGGGGTGCAGTGCTGGGGTTATTGCGGTCGATCTTGCCAAGGACCTTTTGCAGGTTCATAGGAATACTTATGCCGTGGTTGTTAGCACTGAGAACATTACTCAGAATTGGTACTTTGGGAACAAGAAATCCATGCTCATTCCCAATTGCCTCTTCCGGGTCGGCTGTTCCGCGTTGCTGCTGTCGAACAAGCCGGCCGATCGGAGGCGGGCCAAGTACCGGCTTGTGCATGTTGTGAGGACTCATCGCGGTGCCGATGACAAGGCGTTCCGGTGCGTTTACCAGGAACAGGATGATGCTGGCAAGACTGGTGTTTCTTTGTCAAAGGATTTGATGGCGATTGCTGGTGGAGCATTGAAAACCAACATCACCACACTTGGTCCTTTGGTGCTACCAATCAGTGAACAGCTTCTGTTTTTCGTGACTTTGCTGATGAAGAAGTTGTTCAAGGCTGATGTGAAGCCTTACATACCGGATTTCAAGCTTGCTTTTGATCATTTTTGCATACATGCTGGAGGCAGGGCTGTGATTGATGAGCTGGAGAAGAACCTACAGCTGCGTTCTGAGCATGTGGAGGCTTCTAGGATGACCCTGCACCGGTTTGGGAACACTTCCTCTAGCTCCATTTGGTATGAATTGGCTTACATTGAAGCCAAAGGGAGGATGAAGAAGGGCAACAGGGTTTGGCAAATTGCATTTGGAAGTGGTTTCAAATGTAACAGTGCTGTTTGGCAGGCACTGGGAAATATTAAGCCTTCTCCTAATGGACCATGGGAAGACTGCATTGATAAGTATCCTGTGGAAATTGTCACATAG 1536 0.5195 MTTGGGGGGGGSAVGVQIHHQTRMALPDFLQSVNLKYVKLGYHYLISNLLTLFLVPLILVTLIQVSQTTDLHHLWLHLQYNLLTILTCSAVLVFGLTLYAVTRPRAVYLLDSACFRPAEHLKAPFRSFMDHSRLTGDFEESSLDFQRKILERSGLGEETYVPEAMHSIPPQPSMAAARAEAEQVMFGALDNLFHNTSLKPKDIGILIVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFVTLLMKKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLRSEHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMKKGNRVWQIAFGSGFKCNSAVWQALGNIKPSPNGPWEDCIDKYPVEIVT* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0145 511 CDD CHS_like 89 484 - -
Pvu1g0145 511 Gene3D - 125 486 IPR016039 GO:0016746
Pvu1g0145 511 SUPERFAMILY Thiolase-like 316 485 IPR016039 GO:0016746
Pvu1g0145 511 PIRSF Very_long_ch_3-ktacl-CoA_syn 28 511 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu1g0145 511 PANTHER 3-KETOACYL-COA SYNTHASE 4 20 510 - -
Pvu1g0145 511 SUPERFAMILY Thiolase-like 93 311 IPR016039 GO:0016746
Pvu1g0145 511 Pfam FAE1/Type III polyketide synthase-like protein 99 388 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pvu1g0145 511 PANTHER 3-KETOACYL-COA SYNTHASE 20 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pvu1g0145 511 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 404 485 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0145 Pvu-Chr1 1177105 1180342 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0145 1 1177105 1180342 Pvu1g0145 1 1177105 1180342 ECH