Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0133 ATGGAGTTCGGAACTGCCGCCGCGACTCTCACGAAGAAGCTCTCCAACGGCTACGGCGTCTCCGGAAGATCCGCGTACGACGGCGTTTTCGCCGCTCCAGTCAAGCTTCGCGCTCCGACTTTCTCCTCTCAATTCGACGATTACCGCGAGATTTTCGGCGCCGCCGGAGCTTCGCTCGGCTCCTCTATTCCTATTCTGGAACTTCCGGAGCTCAGCGAGAGGAAGAAGAAGATCGACGACGTTGGGCGGTCGAGGGTCGATTACTCAATGGTCTTCGGCGGGTTTGGGAGCCTTGACGCTGCCGTGCCCTTCGAGGAGTTAGTGACTGAGCCTGTGGAGAAAGATAGCTTCACTATACGGAGTAAGATCAAAGGAGAAAACCAATCTTTCCAGCCAGAGCTTACTACTTGTTCGAAGGAAATTCCAGTGAAATCATGGTCATCCCATGATGCCAAAAGGGTCAATATGTCATATCATAAAGTTAACCAAGGAAGTGAAAATGGAACAAGTGGGACAACACATATAGCTCAACTCCATGCAATCCCTGCTTACACTCGATTAATCGAAGAAGTCAAGCCAATGAAGATAAACGGAGCTAATAAGTCTATACCAGTAGCACAAGATACTTATTCTGGTAGTCACGTTGATGAGGGGATAAAAGAAGCTGCACATTCTACTAAGTCATATACTAGTGCTTCAGCTGATAATTCTAAGAAACAGTCTTCCAACAATGGAGTAAAAGTTAAAAATAGATCTGATTCCACTGATCTGTTTTTTGATGCATGTGAGATCAGTAATGGAACACATCATGTTAAAGTTCCTCGATCAGAGACTACAGAATCTAACATGAATAAACAAAAAGGAGATGCTCTGAAATCAACGGCAATGAAATTCCAGGCATCTAAAAGTAGCTCATCCGAAGGTGTTGCTGGTGCAGATTCGCCACCATATTCAGATGACATGGTAGACTGTAATTCAGAGGTAGCTGCTTGTGTAGCTGCTTTAAGAAAGGCAATGGAAGAGGCTCAATCTAATATTGAATTGAAAGCTGAGGGGAAAAGAGAGGCTAAAGTCACTCATAGAACAATGAAACTTGATAGAAAGCTAACATTAAGAGAAAAGGATTCTTCTCTAAATGCTTCTTCTGAGGTAGGGAAGTCAACGATGAGAATGGAGAAAGTGAGGCCAGATCTGGGGGCAGAAGAAACCTGTGGTGCTAAAGAAGTTGTAGGCGAAACACAGAAGAAGATGAAATCAGATCAAGCAAAACATGAGAAAGAGGTTGAACAAAAAGAATCAAATCATAAGGGAAAAACACTTGAGCTGAAAGAGGCAAACAAGAGCGAGCAGTACTTTGATACAACAGATAGGAATACACCTGAAAAACCTGAAGAATGTGATGAAACGATAGAAATGGTTAGGGAGTATTGGGGGATGGAGAATAATGAAGAGAAGCTCCATGCAGACAATGAAGCAAGTGCATATGAAGAACTTGTCCAAGAAACTAAACATAGGTGTCAAGATGTAGTAGATGAGACAAATATGATTCAGGAGGTATTTGAAAATGTGGAAGTTGAGAATAGGGTTAAATCTTTTAATGAACCGGAAGTCTATGAAAGCAATCTTGGTGGGCAAGGGTTAATAACAGGTAATGGGAAAAAAATTGCTTGTGAACCAGAAGATGGCAACAAATTTGAAGGGTCCTTTGAGCTAGAAGAATGCAAAATAAATTTGAGAGCTATTCAGGAACCACGACAGGCTGAGAAGAATATTACTGAAGAGCTAAACGGAAGTGAGAATAAAGTTGATGTGTTCAGTGAACTGGAAGAATGTGAATCGGCAGAGGTTCTGGAACCACTTGACAATGAGAGTGTGTGCAGTCTACATGCCATAAATTTGACTAATATGGAGGAAGCCACAGAGAACTTTGGGTGTTTAGAGGATAGAAATAAAATAAATGATTCTGGTTTTCTGGATTTCAGTCAAGAGACTGAACATTCCTGTCAGAGAGAAGCCAGAGAAGGCACTGATAATAGCTTTAGCAATATTTGTATGCAGGAAATACTGGAGGATACCCTGGACCATATTCATGCTAAGGAAGAAATTTTCGAAAGAACTACTAAGAAAAGTGAATTATATGGAAGTGACATGGTTCTAGATGCCCAAGCAAGTGAGACTGGATTTGAAGGAGCCACTCAACTGGTGGATGGAAATACAAGGGAAAGGATAGATAACAAGGAGCCAGTTAGAGTGACTCTATCTGATCCTTGTTGCGAGGAGGTAAAGGCAGAGAAAACTGGCAAGACCACAGAAACCAGTTCAAGCTATGAGCCAGATGAAAGTGAGAAGTTGAACAAGACTCAGGCAGCTGATATAATCACTGAAAATGAGGAAACTTTGGAAGTAAATCTAGAGGTGCATTCATCTGATGTGCTGGATGGTATATCGGGAGCAAGTAGTGATTCATTTCAACAAGAGAGATATGAAGAAACAGACCCGGTTCATGAGACAAATGATTTCCTTGATAAACATGCAGATGAGACTTCTTCCTTCATTCAAGTTGCCCTTGAACTCAATGAAGCAGACAGTCAAATACAAAATATATTTGAAACAGAGACTTCCGAAGGTGCTGCTACAAATACTGGTGACACTGACATAAAGGCTAGGCAAAACTTAGATCAGTGCTGGGAAAAGTCAGAAAATTACTGCAATCTGGAAATGCCTGTTGAAGACACAACTCCTGAGTCTGTTGAAATCTGCAAGGATGCAAAGGACACAAGAGATGCATTAGATGAAGATGTGGACGAGAATAGATCTAACTCCTCCAATGGGGAGATTTTGTTTGACAAAGAAGACATTCTAGACGAATCCCAGATACCCAGTACCTCTGATTGGAAATCAAGTCCCTCCAAAGAAGAGGAGAAGGTTGAATCAAGTCACAGCAATACGAGGGACAGTAATCAAGCATCCGCAATGGAAGAGAAGGGAGCAAATGACAACTTGCATAAGGAAGAGCAGGCAAGGGAACACCTCAAAAAACTCGATGCAGCAAAAGAGAGAGAAAAAGAAAAGGAGAAATTAGCTGTAGAAAGAGCAATTCGTGAAGCACGTGAAAGGGCATTTGCTGATGCCAGAGAAAGGGCGGCTCAAGAGAGAGCTGCTGCAGAAGCACGTCAGAAAAACATTTCTGACGGACGAGAAAGGCTAGGAAAAACCACTAGTCAGGCAAATGAGAAGACCCCAGCTGAGAAGGCTGCTATGGAGGCAAAACTTAAAGCTGAACGTGCTGCTGTGGAGAGAGCAACTTCAGAGGCACGGGCACGGGCCCTAGAAAGGGCACTTTCTGAGAGAGCTGCCTCTGATGCAAGAAATAAATCTGACAAACCTGTTGCAGGCTTTGCGGCTTCCCGTGATAATGCAATGAAGCAAAATTTCCATTCAAAATCTTTCAGCTATGGTGTTCGTGATTCTACTGATGCATTTGATGGAGCTAATGGCGATTCTGCTCAGAGATGTAAAGCTAGGTTTGAGAGGCATCAGAGAATAGGGGAACGTGTGGCACATGCTCTTGCAGAAAAGAATACGCGTGACCGGCTTGTGCAGAAGGAGAAAGAGGAGAGAAATAGGGTAGCAGAAGTTCTTGATGCTGATGTTAAAAGATGGTCAAGTGGAAAAACAGGAAACTTGAGGGCATTGCTTTCTACATTACAATATATTCTTGGCCCCGACGGTGGTTGGCAACCGATTCCTTTGACAGATGTAGTAACCACCCCCCAAGTAAAGAAAGCTTATCGTAAAGCTACTCTTTTTGTGCATCCTGATAAGCTGCAGCAGCGGGGAGCAAGCATTCAACAAAAGTACATCTGCGAGAAGGTTTTTGATCTTCTAAAGGATGCTTGGAACAGATTTAACATGGAAGAACGATAA 3927 0.4281 MEFGTAAATLTKKLSNGYGVSGRSAYDGVFAAPVKLRAPTFSSQFDDYREIFGAAGASLGSSIPILELPELSERKKKIDDVGRSRVDYSMVFGGFGSLDAAVPFEELVTEPVEKDSFTIRSKIKGENQSFQPELTTCSKEIPVKSWSSHDAKRVNMSYHKVNQGSENGTSGTTHIAQLHAIPAYTRLIEEVKPMKINGANKSIPVAQDTYSGSHVDEGIKEAAHSTKSYTSASADNSKKQSSNNGVKVKNRSDSTDLFFDACEISNGTHHVKVPRSETTESNMNKQKGDALKSTAMKFQASKSSSSEGVAGADSPPYSDDMVDCNSEVAACVAALRKAMEEAQSNIELKAEGKREAKVTHRTMKLDRKLTLREKDSSLNASSEVGKSTMRMEKVRPDLGAEETCGAKEVVGETQKKMKSDQAKHEKEVEQKESNHKGKTLELKEANKSEQYFDTTDRNTPEKPEECDETIEMVREYWGMENNEEKLHADNEASAYEELVQETKHRCQDVVDETNMIQEVFENVEVENRVKSFNEPEVYESNLGGQGLITGNGKKIACEPEDGNKFEGSFELEECKINLRAIQEPRQAEKNITEELNGSENKVDVFSELEECESAEVLEPLDNESVCSLHAINLTNMEEATENFGCLEDRNKINDSGFLDFSQETEHSCQREAREGTDNSFSNICMQEILEDTLDHIHAKEEIFERTTKKSELYGSDMVLDAQASETGFEGATQLVDGNTRERIDNKEPVRVTLSDPCCEEVKAEKTGKTTETSSSYEPDESEKLNKTQAADIITENEETLEVNLEVHSSDVLDGISGASSDSFQQERYEETDPVHETNDFLDKHADETSSFIQVALELNEADSQIQNIFETETSEGAATNTGDTDIKARQNLDQCWEKSENYCNLEMPVEDTTPESVEICKDAKDTRDALDEDVDENRSNSSNGEILFDKEDILDESQIPSTSDWKSSPSKEEEKVESSHSNTRDSNQASAMEEKGANDNLHKEEQAREHLKKLDAAKEREKEKEKLAVERAIREARERAFADARERAAQERAAAEARQKNISDGRERLGKTTSQANEKTPAEKAAMEAKLKAERAAVERATSEARARALERALSERAASDARNKSDKPVAGFAASRDNAMKQNFHSKSFSYGVRDSTDAFDGANGDSAQRCKARFERHQRIGERVAHALAEKNTRDRLVQKEKEERNRVAEVLDADVKRWSSGKTGNLRALLSTLQYILGPDGGWQPIPLTDVVTTPQVKKAYRKATLFVHPDKLQQRGASIQQKYICEKVFDLLKDAWNRFNMEER* 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0133 1308 PANTHER AUXILIN-LIKE PROTEIN 570 1308 - -
Pvu1g0133 1308 PANTHER AUXILIN-LIKE PROTEIN 1 343 - -
Pvu1g0133 1308 PANTHER AUXILIN-LIKE PROTEIN 343 599 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 1041 1099 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 928 1027 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 223 250 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 270 318 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 762 785 - -
Pvu1g0133 1308 Coils Coil 1084 1113 - -
Pvu1g0133 1308 Coils Coil 414 434 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 412 437 - -
Pvu1g0133 1308 SUPERFAMILY Chaperone J-domain 1173 1304 IPR036869 -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 296 311 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 967 981 - -
Pvu1g0133 1308 CDD DnaJ 1256 1301 IPR001623 -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 1083 1099 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 1041 1073 - -
Pvu1g0133 1308 Gene3D DnaJ domain 1180 1308 IPR036869 -
Pvu1g0133 1308 Coils Coil 1000 1039 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 224 250 - -
Pvu1g0133 1308 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 343 599 - -
Pvu1g0133 1308 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 570 1308 - -
Pvu1g0133 1308 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 343 - -
Pvu1g0133 1308 MobiDBLite consensus disorder prediction 996 1027 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0133 Pvu-Chr1 1098268 1104583 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0133 1 1098268 1104583 Pvu1g0133 1 1098268 1104583 ECH
Pvu1g0133 1 1098268 1104583 Pvu9g0585 9 10404008 10412322 PCT