Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0130 ATGAAGCTTGGTTTCTTTCTGTTCTCTCTAATTTTCTACCTGATACTGGAATATGGGATCTTCAAAGTAGAAGGTGATGATCTTGGTGACGAGTTTGTGAAAGTAAGAGGGGTGCAGCTTGTGTTGAATGAAAGACCCTACTATGCTAATGGTTATAATGCCTATTGGCTCATGTACATGGCCTCTGATCCATCTCAGAGAAACAAGGTCACATCTGCATTTCAAGTAGCTGCAAACCATGGACTTAGCATAGCAAGAACATGGGCTTTCAGTGATGGTGGAGATAGGCCCCTTCAGTACTCTCCTGGATCATACAATGAGGACATGTTCCTGGGACTGGACTTTGTAATATCAGAAGCCAGAAGGTATGGGACCAAGTTGGTGTTGAGTTTGGTGAATAACTATGATAACTTTGGAGGAAAGAAACAATATGTGGAGTGGGCTAAGAGTGAGGGCCAGTCCCTACATTCTGAAGATGATTTCTTCACAAACCCTCTTGTCAAGGGATTCTACAAAAACCACGTCAAGAGTGTACTCACAAGGCGTAATAACTTCACGGGAGTGGTTTACAAAGATGATCCAACCATAATGGCTTGGGAACTCATGAATGAAGTTAGATGCCCTTCTGATCATTCAGGGAACACAGTTCAGGCTTGGATTACTGAAATGGCATCTTACTTGAAATCCATAGATGGAAACCATTTACTTGAGGTTGGTCTAGAGGGCTTCTATGGGCCGTCAAAGAAAGAGTCTAATCCAAATTTCCAAGTTGGAACAGATTTCATTGCAAACAACCAAATCCCTGGCATTGATTTTGCAACAGTTCATTCATACCCTGATCAATGGTTACCAGGATCAAGCAATGAAGAACAAACCTTATTTTTGGTTAGTTGGTTGAATGATCACATAAAAGATGCACAGAGCATTCAGAAGCCAGTTCTCTTTGCTGAGTTTGGAGTAGCAAGAAAAAACATGAGCAGTGACTCAACTGCAATAAGGGACCAATTTTACAACTTGGTGTATTCTGCAATCTATTCATCAGCAAGTGATGGTGGGGCTGCAACTGGTGGCTTATTTTGGCATCTTCTAGCAGAAGGAATGGATGCTTTTAATGATGGCTATGAAGTGCCCTTAGATGAGAATAGCTCAACTGCTACTTTGATTGCTCAAGAGTCTCAAAAGCTAAACAGAATCAGAATGAAGAAATCCTCCAGAGTTAAGAACAAAGCAAGGAAAGTTAGAAACTGA 1248 0.4127 MKLGFFLFSLIFYLILEYGIFKVEGDDLGDEFVKVRGVQLVLNERPYYANGYNAYWLMYMASDPSQRNKVTSAFQVAANHGLSIARTWAFSDGGDRPLQYSPGSYNEDMFLGLDFVISEARRYGTKLVLSLVNNYDNFGGKKQYVEWAKSEGQSLHSEDDFFTNPLVKGFYKNHVKSVLTRRNNFTGVVYKDDPTIMAWELMNEVRCPSDHSGNTVQAWITEMASYLKSIDGNHLLEVGLEGFYGPSKKESNPNFQVGTDFIANNQIPGIDFATVHSYPDQWLPGSSNEEQTLFLVSWLNDHIKDAQSIQKPVLFAEFGVARKNMSSDSTAIRDQFYNLVYSAIYSSASDGGAATGGLFWHLLAEGMDAFNDGYEVPLDENSSTATLIAQESQKLNRIRMKKSSRVKNKARKVRN* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0130 415 PANTHER - 6 412 IPR045053 GO:0004553
Pvu1g0130 415 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 6 412 - -
Pvu1g0130 415 SUPERFAMILY (Trans)glycosidases 32 387 IPR017853 -
Pvu1g0130 415 Pfam Cellulase (glycosyl hydrolase family 5) 99 326 IPR001547 GO:0004553|GO:0071704
Pvu1g0130 415 Gene3D Glycosidases 29 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0130 Pvu-Chr1 1078192 1081813 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0130 1 1078192 1081813 Pvu1g0130 1 1078192 1081813 ECH
Pvu1g0130 1 1078192 1081813 Pvu9g0617 9 10651950 10655910 PCT