Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0129 ATGGAAGCAAGCATTGCAACACCAGGTGCAGGTGGTATTGTAGCTACCAAGGGGTTTGGGACAAGAAGCAGAGGTTCTGGCTTCTGGGGTGAGAACACAAGGGGAAGTCTTAATGTAAGATTTCACAGTACTCAACCATGCAAGAGTGTTAAGGCTAGAAGTTCCAACTCTGGCATTGCATACGCTGTGTACACTCCAGACATCAACACAGAGTCTCCGAGATCCATTATTCAGAGTCCAAAAACAAACCCTGAAAATGTAGCTGCCATCATATTGGGTGGAGGTGCTGGAACTCCACTCTTTCCTCTTACCAGCACAAGAGCCAAGCCTGCTGTTCCCATTGGAGGGTGTTACAGACTGATAGATGTTCCTATGAGCAATTGCATCAACAGTGGCATCAGGAAAGTGTACGTTTTAACTCAGTTCAACTCTTTCTCTCTCAATGGCCACCTCTCTCGCACGTATAATTCTGGAAATGGAGTGAACTTTGGAGGCGGTTTTGTAGAGGTCTTGGCTGCTACTCAAACTCCTGGAGAATCTGGGAGCAAATGGGCTCAAGGGACAGCTGATGCAGTGAGAAGATTTATTTGGGTTTTTGAGGATGCTAAGAACAAGAATATTGAACACATAATGATAATTCCTGGTGACCATCTTTGTCGGATGGACTATATGAAGCTTGTGGAGAAACATAATGCGAGCAAGGCTGATATCACAGTTTCATGTGTTCCTATGGATGAAAGCGGTGCATTAGACCATGGGGTTATGAAAATTGATAGAAATGGACGGATTACAGAGTTTGTAGAAAATCTAAATGAAACAGATGTGAACACAATGCGTGTTGATACAAGGCTCCTAGGCTTAAGTGCAGAAGATGCAGAGAAATATCCTTTCATTTCTCCAATGGGTGTTTTTGTGTTCAGAACTGAGGTCCTGCTGAAACTGCTAAGATGGAGCTGTCCTTCTTGCAATGACTTAGGATCTGAACTTATCCCATCTTCTTTGAGGGACCACAAAGTTCAAGCATATATGTTCAACGAGTACTGGAGAGATATGGGCACTATCAAGTCCTTCCTTGAAGCCAATCTGGAACTAACAGAACAGTCTCCAAAATTTGAATTCTATGATCCGAAGACGCCTTTCTTCACTTCCCCAGGATTCCTACCACCCACTAAACTAATAAAATGCAAGCTAGTGGATGCAATTATTTCTCATGGTTGTTTCTTGAATAAGTGTAAAGTTCAACATTCTATTGTTGGTCAGCGCTCACGTTTAGAGGCTGGTTCAGAGCTTCAGGATACCATGATGATGGGTGCTGACTATTATCAAACTGATTCTGAAATTGCAACTCTGTTGGCAGAGGGAAAGGTTCCAGTTGGTGTAGGAGAGAATACCAAAATCAGGAATTGCATAATTGACAAGAATGCCAAGATAGGAAAAAATGTGATTATTGCCAATGCTGATGGTGTTCAAGAAGCAGACAAGCCTGAAGAGGGATTCTACATTAGGTCTGGCATCGTAGTTATAGTGAAGAATGCAACAATTAAAGATGGAACAGTGATTTGA 1563 0.4255 MEASIATPGAGGIVATKGFGTRSRGSGFWGENTRGSLNVRFHSTQPCKSVKARSSNSGIAYAVYTPDINTESPRSIIQSPKTNPENVAAIILGGGAGTPLFPLTSTRAKPAVPIGGCYRLIDVPMSNCINSGIRKVYVLTQFNSFSLNGHLSRTYNSGNGVNFGGGFVEVLAATQTPGESGSKWAQGTADAVRRFIWVFEDAKNKNIEHIMIIPGDHLCRMDYMKLVEKHNASKADITVSCVPMDESGALDHGVMKIDRNGRITEFVENLNETDVNTMRVDTRLLGLSAEDAEKYPFISPMGVFVFRTEVLLKLLRWSCPSCNDLGSELIPSSLRDHKVQAYMFNEYWRDMGTIKSFLEANLELTEQSPKFEFYDPKTPFFTSPGFLPPTKLIKCKLVDAIISHGCFLNKCKVQHSIVGQRSRLEAGSELQDTMMMGADYYQTDSEIATLLAEGKVPVGVGENTKIRNCIIDKNAKIGKNVIIANADGVQEADKPEEGFYIRSGIVVIVKNATIKDGTVI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0129 520 SUPERFAMILY Nucleotide-diphospho-sugar transferases 86 481 IPR029044 -
Pvu1g0129 520 Gene3D Hexapeptide repeat proteins 386 520 - -
Pvu1g0129 520 CDD LbH_G1P_AT_C 388 514 - -
Pvu1g0129 520 SUPERFAMILY Trimeric LpxA-like enzymes 383 520 IPR011004 -
Pvu1g0129 520 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 93 112 IPR005836 GO:0005978|GO:0008878
Pvu1g0129 520 CDD ADP_Glucose_PP 89 350 - -
Pvu1g0129 520 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 20 520 IPR011831 GO:0005978|GO:0008878
Pvu1g0129 520 Pfam Nucleotidyl transferase 89 366 IPR005835 GO:0009058|GO:0016779
Pvu1g0129 520 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 20 520 - -
Pvu1g0129 520 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 70 385 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0129 Pvu-Chr1 1072803 1077581 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0129 1 1072803 1077581 Pvu9g0618 9 10654688 10659730 PCT