Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0122 ATGGCCTCATTCAGTGGAACCTCTAGCATTTCCACAAAGCAGATTCAGAGTTCAGGGTCTGAGGAGGATCTGCAGCGTCTGATGGACCAAAAAAAGAAGAAGAGAAAGCAATCCAACCGTGACTCGGCCAGAAGATCAAGGATGCGAAAGCAGAAGCACATGGACGATCTCACTGCACAACTGCAGCGTCTACAGACGGAGAATAACCTACTCTTCACCCAACTCAACATCACCACCCAATACCATCTCAAGCTCCAGGCTCAAAACTCCATTCTCATGGCCCAGAAGACTGAACTCACCCAAACCCTTCACTCGCTCAATCACATCATCAATCTCATCAACAAAACAACACCCACAAACGATAACCATCATTGCTATAACAACATCAACAATAACTTCATGAATCCCATGCACATGCCCTGCCTTAACCAACCCATTGTGGCCACTGCAGACAACATGTTTCTGTGGTGA 471 0.4671 MASFSGTSSISTKQIQSSGSEEDLQRLMDQKKKKRKQSNRDSARRSRMRKQKHMDDLTAQLQRLQTENNLLFTQLNITTQYHLKLQAQNSILMAQKTELTQTLHSLNHIINLINKTTPTNDNHHCYNNINNNFMNPMHMPCLNQPIVATADNMFLW* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0122 156 Coils Coil 21 41 - -
Pvu1g0122 156 CDD bZIP_plant_GBF1 32 80 IPR045314 GO:0003700|GO:0006355
Pvu1g0122 156 MobiDBLite consensus disorder prediction 1 57 - -
Pvu1g0122 156 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Pvu1g0122 156 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Pvu1g0122 156 MobiDBLite consensus disorder prediction 1 23 - -
Pvu1g0122 156 Coils Coil 47 74 - -
Pvu1g0122 156 Pfam Basic region leucine zipper 29 75 IPR004827 GO:0003700|GO:0006355
Pvu1g0122 156 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 152 - -
Pvu1g0122 156 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Pvu1g0122 156 Gene3D - 29 82 - -
Pvu1g0122 156 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Pvu1g0122 156 PANTHER BZIP TRANSCRIPTION FACTOR 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0122 Pvu-Chr1 1022018 1022488 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu1g0122 bZIP_1 6.7e-09 CL0018