Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0113 ATGGAAACCAACTCAGTTTCCAAGCTTCTACTACTTGTTTTCACCATCTTCTTTGTGGGTTCTGAGTTGATCCATTGCAGTGTCACTTACGATAGAAAGGCCATTATCATCAATGGCCAAAGGAGAATCCTCATATCTGGATCCATTCACTACCCCAGAAGCGCCCCTGAAATGTGGGAGGATCTAATTAGGAAGGCAAAAGATGGAGGCCTTGATGCTATTGACACTTATGTCTTTTGGAATGTTCATGAACCATCTCCTGGCAATTACAATTTTGAAGGGAGGTACGATCTGGTACGGTTCATTAAGACAGTGCAAAGGGTGGGGCTCTATGTGCATCTTCGGATTGGACCTTATGTGTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGCATCAGCTTCAGAACAGATAATGGCCCTTTCAAGGCTGCAATGCAAGGTTTCACTCAGAAGATAGTCCAGATGATGAAGAATGAAAAGCTGTTTCAGTCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAAAACGAGTATGGACCAGAAAGCAAGCAATTGGGAGGTGCTGGTTATGCATACACAAACTGGGCTGCAAAGATGGCTGTTGGATTGAACACAGGAGTCCCCTGGGTGATGTGCAAGCAAGATGATGCCCCAGATCCAGTGATAAATGCCTGTAATGGATTTTATTGTGATTATTTCTCTCCAAATAAACCATACAAGCCTAACCTTTGGACTGAGTCTTGGAGTGGCTGGTTCACAGAGTTTGGTGGTCCAATTTACCAGCGACCGGTTCAGGATCTAGCTTTTGCAGTTGCTCGTTTCATACAAAAGGGTGGTTCATACATAAATTATTACATGTACCATGGAGGAACTAATTTTGGACGATCAGCTGGAGGGCCATTCATTACGACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTTTGATCAGGGAACCTAAATATGGTCATTTGATGGACCTTCATAAAGCTATTAAGCAAAGTGAACGTGCTTTGGTTTCTTCAGATCCCACTGTCACATCATTAGGATCGTATGAGCAGGCTCATGTGTTCTCTTCAAAAAGTGGAGCATGTGCAGCTTTTCTAGCAAACTATCATTCCAATTCTGCTGCAAGAGTGACCTTCAATAACAGGAAATATGACTTGCCTCCTTGGTCCATAAGCATCCTCCCCGATTGTAAAACAGATGTTTTCAACACTGCAAGAGTGAGGTTTCAAACTACAAAGATACAAATGTTACCTAGCAACTCTAAGTTGTTCTCATGGGAGACGTATGATGAAGATGTATCTTCACTAGAAGAAAGTTCAAAGATTACAGCTTCTGGACTATTAGAACAGCTAAATGTCACCAGAGACACTAGTGACTATCTATGGTATATAACCAGTGTTGACATTAGTGCATCAGAATCCTTTCTCAGAGGGGGGAACAAGCCCAGCATTAGTGTGAATTCTGCAGGCCATGCTGTCCATGTGTTTATCAACGGTCAATTTTCAGGCTCAGCTTTTGGAACAAGTGCAGACAGAACTTGCACATTCAATGGCCCTGTCAACCTACGCTCTGGAACCAATAAAATAGCACTTCTCAGTGTTGCTGTTGGGTTACCTAATGTTGGATTCCATTTTGAAACATGGAAAGCTGGGATCACTGGAGTTTTGCTTCATGGACTTGACCATGGACAGAAAGATTTGACTTGGCAGAAATGGTCATACCAGATTGGCCTAAAAGGAGAGGCTATGAATTTGGTGTCTCCCAATGGGGTTTCATCTGTTGATTGGGTGGGAGACTCACTGGGTGTCCAAAGCCAGTCACAGTTGAAATGGCACAAGGCTTATTTCAATGCACCTGATGGAGTTGAACCATTGGCCTTGGACCTAAGCAGTATGGGAAAGGGTCAGGTATGGATCAATGGACAAGGCATAGGAAGATATTGGATGGTTTATGCAAAGGGTGCCTGTAATTCTTGCAACTATGCTGGGACATACCGGCCTGCAAAATGCCAACTTGGTTGTGGACAACCTACCCAACAATGGTATCACGTGCCAAGATCATGGTTAAAGCCAACACATAACTTGATTGTGGTGCTTGAGGAATTGGGTGGCAATCCTTGGAAAATATCTCTACAGAAAAGGACAATACATACACCAGCATCTAGTGAACCCAATTCAAAGAACTGA 2220 0.432 METNSVSKLLLLVFTIFFVGSELIHCSVTYDRKAIIINGQRRILISGSIHYPRSAPEMWEDLIRKAKDGGLDAIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQRVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESKQLGGAGYAYTNWAAKMAVGLNTGVPWVMCKQDDAPDPVINACNGFYCDYFSPNKPYKPNLWTESWSGWFTEFGGPIYQRPVQDLAFAVARFIQKGGSYINYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLMDLHKAIKQSERALVSSDPTVTSLGSYEQAHVFSSKSGACAAFLANYHSNSAARVTFNNRKYDLPPWSISILPDCKTDVFNTARVRFQTTKIQMLPSNSKLFSWETYDEDVSSLEESSKITASGLLEQLNVTRDTSDYLWYITSVDISASESFLRGGNKPSISVNSAGHAVHVFINGQFSGSAFGTSADRTCTFNGPVNLRSGTNKIALLSVAVGLPNVGFHFETWKAGITGVLLHGLDHGQKDLTWQKWSYQIGLKGEAMNLVSPNGVSSVDWVGDSLGVQSQSQLKWHKAYFNAPDGVEPLALDLSSMGKGQVWINGQGIGRYWMVYAKGACNSCNYAGTYRPAKCQLGCGQPTQQWYHVPRSWLKPTHNLIVVLEELGGNPWKISLQKRTIHTPASSEPNSKN* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0113 739 SUPERFAMILY Galactose-binding domain-like 581 725 IPR008979 -
Pvu1g0113 739 SUPERFAMILY Galactose-binding domain-like 402 565 IPR008979 -
Pvu1g0113 739 PANTHER BETA-GALACTOSIDASE RELATED 3 732 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 Gene3D - 611 731 - -
Pvu1g0113 739 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Pvu1g0113 739 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Pvu1g0113 739 Gene3D Glycosidases 24 344 - -
Pvu1g0113 739 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Pvu1g0113 739 PANTHER BETA-GALACTOSIDASE 3 732 - -
Pvu1g0113 739 SUPERFAMILY (Trans)glycosidases 27 342 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0113 Pvu-Chr1 950888 956952 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0113 1 950888 956952 Pvu2g1721 2 30942687 30945153 ECH
Pvu1g0113 1 950888 956952 Pvu1g0113 1 950888 956952 ECH
Pvu1g0113 1 950888 956952 Pvu9g0129 9 2021544 2026965 PCT