Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0112 ATGGCTGAAGAGGGACAAGTCATTGCTGTGCACACCCTTGAGGCGTGGCAAGAGCAATTCCAGAAGGGAGAGGACTCCAAAAAGCTGGTTGTGGTGGATTTTACTGCTTCCTGGTGTGGTCCATGCCGTTTTATTGCCCCAATTCTTGCAGAAATTGCCAAGAAGACACCTGAAGCAATCTTCCTCAAGGTGGATGTGGAGGAACTGAGTACTGTTGCTGAGAAATGGTCCATTGAGGCTATGCCAACCTTCTTCTTCTTGAAAGAAGGTAAGCTGGTGGACAGGATTATGGGTGCTAAGAAGGAAGAGTTGCAAGGAACCATAGACAAGCATTTGTCTCATACTGCTGCTGCTTGA 357 0.4762 MAEEGQVIAVHTLEAWQEQFQKGEDSKKLVVVDFTASWCGPCRFIAPILAEIAKKTPEAIFLKVDVEELSTVAEKWSIEAMPTFFFLKEGKLVDRIMGAKKEELQGTIDKHLSHTAAA* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0112 118 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
Pvu1g0112 118 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Pvu1g0112 118 CDD TRX_family 18 109 - -
Pvu1g0112 118 PRINTS Thioredoxin family signature 30 38 - -
Pvu1g0112 118 PRINTS Thioredoxin family signature 38 47 - -
Pvu1g0112 118 PRINTS Thioredoxin family signature 77 88 - -
Pvu1g0112 118 Pfam Thioredoxin 9 109 IPR013766 -
Pvu1g0112 118 PANTHER THIOREDOXIN 1 113 - -
Pvu1g0112 118 SUPERFAMILY Thioredoxin-like 4 113 IPR036249 -
Pvu1g0112 118 Gene3D Glutaredoxin 1 118 - -
Pvu1g0112 118 PANTHER THIOREDOXIN 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0112 Pvu-Chr1 949438 950668 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0112 1 949438 950668 Pvu1g0112 1 949438 950668 ECH
Pvu1g0112 1 949438 950668 Pvu9g0130 9 2027583 2029124 PCT