Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0110 ATGTCTCCCAATCGACGCTTCGAAGTTCCAACCATGGACATTCATCCTAGCCACTACGAAGAAATTGCTATAAATGAACAAGATGTGAACAACATCATTCTGTCGTATCTTGCACACAATTTCTACGAAGAGTCTTCAGAGGCCTTCATTGCTTGCATTGGGATGCAGCGGCCTGCAGAATATTTGGAGAGCATGCAAACAAAAAAAAGAATCGTTAACTATGTACTGGAGGGAAATTCACTGAAAGCTATTGAGCTCATTGAACAGCTGTCACAGGATATTTTAAAAAACAATAAGGATTTGATGCTTGATCTTCTAAGCCTTCATTTTGTTGTCCTTGTTTGCTCTCAGAAATGGGCAGAAGCTGTGGAGTTTGCTCAGGCCAATATGAGTTCCTATGCGAGCCACTCAATATATAGCGAAAGAGTTGAAGATTTTATGTCCCTTCTTGCTTTTAAGAATATACTGGAATCTCCAATGGCTCATCTGACTACCACAGGCTATCGGCACCACGTGGTGGGTAATTTGAATGTCGCCCTTCTCGAACACTTTAACCTTCCCAACTGCAGTACTATGGAGCGCCTTATGCAGCAGCTAACATTAGTTAGAGAAGACTTAAGGCGCATGAAGGGGCTTCCACCATTTTCGTTGAGGAATTTTCTTATGCACAGCAGTTAA 678 0.4204 MSPNRRFEVPTMDIHPSHYEEIAINEQDVNNIILSYLAHNFYEESSEAFIACIGMQRPAEYLESMQTKKRIVNYVLEGNSLKAIELIEQLSQDILKNNKDLMLDLLSLHFVVLVCSQKWAEAVEFAQANMSSYASHSIYSERVEDFMSLLAFKNILESPMAHLTTTGYRHHVVGNLNVALLEHFNLPNCSTMERLMQQLTLVREDLRRMKGLPPFSLRNFLMHSS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0110 225 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 64 121 IPR006595 -
Pvu1g0110 225 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 17 220 - -
Pvu1g0110 225 SMART toby_final6 117 212 IPR013144 -
Pvu1g0110 225 Pfam CTLH/CRA C-terminal to LisH motif domain 65 203 IPR024964 -
Pvu1g0110 225 PANTHER RAN BINDING PROTEIN 9-RELATED 17 220 - -
Pvu1g0110 225 SMART ctlh 64 121 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0110 Pvu-Chr1 942345 944975 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0110 1 942345 944975 Pvu1g0110 1 942345 944975 ECH
Pvu1g0110 1 942345 944975 Pvu9g0133 9 2044053 2047408 PCT