Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0105 ATGGCTGATTTAGGCTCAGCCTCTTCCAGGAGAATGTGGTGTTCCTTTCCTGAAAGAATGCAGCTGCATGTGGCCATGCTGGCCTTGCAGTTTGGCTATGCTGGTTTCCATGTCGTCTCAAGGGCTGCCCTTAACATGGGTGTCAGCAAGCTTGTTTTCCCTGTCTATCGTAACATCATTGCCCTGCTTCTACTCCTTCCCTTTGCCTACTTCTTAGAAAAGAAGGAGAGGCCAGCAATGAGTTTAAACTTTGCCTGCCAGTTCTTTCTTCTGGCACTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGAGAACACATCCCCTACCTTCGCATCAGCAATACAGAACTCTGTCCCAGCCATTACATTCCTCATGGCAGCCATTTTCAGAATAGAGCAAGTGAGATTGAACCGAAAAGATGGGTTGGCAAAGGTGGCGGGAACCATTTTGTGTGTGATTGGGGCGACTGTGATCACACTTTACAAAGGTCCAACAATATATAGCCCAGCAACCCGTGTGAACAGCATGAGCAGCAACACAATAACAACACCAGTGTTTGATTTTGGGTCACTCTCACTGGGAGATGCAAAGGGGAAGAACTGGACCCTGGGGTGCTTGTACCTCATAGGACACTGCTTGTCATGGTCTGGTTGGCTTGTGCTGCAAGCACCACTTCTCAAGAAGTACCCTGCTCGCCTCTCTGTCACTTCCTACACCTGTTTCTTCGGACTCTTGCAGTTTTTGGTCATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTCTATATGCGGGAGTGGTGGCATCAGGAATTGCCTTCGCTGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTCGCCATCATGGCAACCATAGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGAGCAGTGCTGATTGTAGCAGGACTGTACTTTGTTTTGTGGGGTAAAAGTGAAGAGAGGAAATTTGCTAGAGAACAGCTTGCGATTGCATCCACCACTGATCATAGCATCATAAGGCCTGCAAGCCACGCCAAAGCATCACTTGCTCAGCCACTTCTTTCTTCATCAACAGAGAATGTCTGA 1179 0.4775 MADLGSASSRRMWCSFPERMQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMSLNFACQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEQVRLNRKDGLAKVAGTILCVIGATVITLYKGPTIYSPATRVNSMSSNTITTPVFDFGSLSLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPLLKKYPARLSVTSYTCFFGLLQFLVIALVLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVAGLYFVLWGKSEERKFAREQLAIASTTDHSIIRPASHAKASLAQPLLSSSTENV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0105 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 350 - -
Pvu1g0105 392 PANTHER WAT1-RELATED PROTEIN 14 369 IPR030184 GO:0016021|GO:0022857
Pvu1g0105 392 PANTHER WAT1-RELATED PROTEIN 14 369 - -
Pvu1g0105 392 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
Pvu1g0105 392 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020|GO:0016021
Pvu1g0105 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0105 Pvu-Chr1 908098 912158 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0105 1 908098 912158 Pvu1g0105 1 908098 912158 ECH
Pvu1g0105 1 908098 912158 Pvu9g0136 9 2084167 2088147 PCT