Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0097 ATGAACGCAATTCGTTCTCGTTGGTTCATGAGAATGGCAGAAAACATCGGAAAGAGCAACCTCGAATCCTCTGCAGCTGCTTCTTCTGCTTCGACAACGACGTCGCGAGGCTTCTGGCCTTCCGTCTTACGGTGGATTCCCACCTCCACCGACCACATCATCAATGCCGAGAAGCGCCTTCTCTCTCTTGTCAAGACACCATATGTTCAAGAACAGATTAATATAGGTTCTGGTCCACCAGATTCCAGAGTTAGATGGTTCCGTTCATCGAGCAATGAACCACGGTTTATTAACACCGTCACGTTTGACAGTAAGGATGATTCTCCTACGTTGGTGATGGTTCATGGATATGCGGCGTCACAGGGTTTCTTTTTTCGTAATTTTGATGCACTTGCCACTCGTTTCAGAGTTATTGCTATCGATCAACTTGGTTGGGGTGGTTCTAGCAGGCCTGACTTTTCATGCAGAAGCACTGAAGAAACCGAGGCGTGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAACCTGAGCAATTTTATACTACTAGGGCATTCTTTTGGTGGTTATGTTGCTTCCAAATACGCACTTAAGCACCCCGAACATGTAAAACACTTGATTCTGGTGGGACCTGCTGGATTTTCGTCGGAATCAGAGAGAATTACAAAGTTCATATCTACATGGAAGGGATCAATCCTGAATCAAATATGGGAATCTAATTTTACGCCTCAGAAAATCATCAGGGGTTTAGGTCCTTGGGGTCCTGATATGGTCCGCAAGTATACCAGTGCCAGGTTTGTTACAAATACAACTGGGGAAATGCTGACAGAATCTGAATCAAGATTACTGACAGATTATGTTTACCATACTTTAGCAGCCAAAGCTAGTGGCGAGCTGTGCTTAAAATATCTATTTTCATTTGGAGCACTGCCGAGGTCGCCTCTTCTTGAGAGGGCATCAGAGTGGAAGGTGCCCACCACTTTCATATATGGTTTTCAGGACTGGATGAATTATGAAGGGGCCCAAGAAGCTCGCAAACATATGAAGGTTCCCTGTGAAATCCTTAGGGTTCCTCAGGCTGGGCACTTTGTGTTCATTGACAACCCAAGTGGCTTCCATTCAGCTGTGGTTTACGCTTGCCGAAGGTTTCTAAGTTCTGATCCAGACAGTGAATCCCTTCCTCAATGGCTAACCACAGCATAG 1206 0.4527 MNAIRSRWFMRMAENIGKSNLESSAAASSASTTTSRGFWPSVLRWIPTSTDHIINAEKRLLSLVKTPYVQEQINIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALATRFRVIAIDQLGWGGSSRPDFSCRSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGFSSESERITKFISTWKGSILNQIWESNFTPQKIIRGLGPWGPDMVRKYTSARFVTNTTGEMLTESESRLLTDYVYHTLAAKASGELCLKYLFSFGALPRSPLLERASEWKVPTTFIYGFQDWMNYEGAQEARKHMKVPCEILRVPQAGHFVFIDNPSGFHSAVVYACRRFLSSDPDSESLPQWLTTA* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0097 401 SUPERFAMILY alpha/beta-Hydrolases 98 377 IPR029058 -
Pvu1g0097 401 PRINTS Epoxide hydrolase signature 134 149 IPR000639 GO:0003824
Pvu1g0097 401 PRINTS Epoxide hydrolase signature 183 196 IPR000639 GO:0003824
Pvu1g0097 401 PRINTS Epoxide hydrolase signature 197 210 IPR000639 GO:0003824
Pvu1g0097 401 PRINTS Epoxide hydrolase signature 325 341 IPR000639 GO:0003824
Pvu1g0097 401 PRINTS Epoxide hydrolase signature 358 380 IPR000639 GO:0003824
Pvu1g0097 401 Pfam alpha/beta hydrolase fold 109 370 IPR000073 -
Pvu1g0097 401 Gene3D alpha/beta hydrolase 95 383 IPR029058 -
Pvu1g0097 401 PANTHER RE40534P-RELATED 14 394 - -
Pvu1g0097 401 PRINTS Alpha/beta hydrolase fold signature 134 149 IPR000073 -
Pvu1g0097 401 PRINTS Alpha/beta hydrolase fold signature 183 196 IPR000073 -
Pvu1g0097 401 PRINTS Alpha/beta hydrolase fold signature 197 210 IPR000073 -
Pvu1g0097 401 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED 14 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0097 Pvu-Chr1 811815 815492 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0097 1 811815 815492 Pvu1g0097 1 811815 815492 ECH
Pvu1g0097 1 811815 815492 Pvu9g0150 9 2294988 2301112 PCT