Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0095 ATGAAACTAACTTTTTCTATCCTCATCACAACTCTCCTCCTCGCCGTCAAACTCCCGCCGCCGTATTCCGTCGTCGCCAGCGCCGCCGGTCAGTGGCAGCTTCTCCACAAAACCATCGGCATTGTCGCCATGCACATGCAGCTCCTCCACACCGACACCGTCGTCATCTTCGACCGCACCGACTTCGGCCTCTCCAATCTCTCCCTCGCCGGCGGCCGCTGCCGCCACGACCCAGATGAAAAGGTCGTCAAAACAGACTGCACCGCCCACTCCGTCGAGTACGACGTCGCCTCAAACACCTTCCGCCCCCTCTTCCTCCAAACCAACATATGGTGCTCCTCCGCCGCCGTCGCCGCCGACGGCACGCTGGTCCAAACCGGCGGCTTCAATGACGGCGAAAGAACTGTGCGCACATTCTTACCGTGCGCCACCTGCGACTGGCGAGAATTCCCCGACGGCCTCGCCGTTCGCCGCTGGTACGCCACAAACCAAAAACTCCCGGACGGCCGCCAAATCATCATCGGCGGGAGAAGACAATTCAACTACGAGTTTTACCCTAAAAGCGACGCCACAGCCAAAAACACCTACTCATTACCCTTCCTCGTTCAAACGAATGATCCTTCCGAAGAAAACAACCTCTATCCCTTCGTTTTCCTCAACGTCGATGGCACCCTCTTCATCTTCGCCAACAACAGAGCCATTCTCTTAGACTACACCAAAAACGCCGTCGTTAAAACGTTCCCCAACATTCCCGGCAACGACCCCAGGTGTTACCCCAGCACCGGTTCCGCCGTTCTCTTGCCCTTACGTAGTAAAAACCCAAACTTTTTTTCTCCAGAAGCTGAGGTTTTAATCTGTGGCGGAGCCCCGAGAGGGGCTTATACACAAGCCAAAAAGGGTACATTTATCGGAGCTTTGAGAACCTGTGCCCGGATTAAAATAACCGACCCGAATCCCACCTGGGTCATGGAGACAATGCCCGGAGGCAAAGGCAGACTCATGAGCGACATGATTCTTCTTCCGAACGGCAACGTTTTGATTGTTAACGGTGCGGGTTCAGGGAGCGCGGGCTGGGAATTCGGGCGCGACCCGGTTCTGGCTCCGTTTGTGTATAACCCGGATAAGGAATTCGGGTCGAGGTTCGAGATTCTTAACGCCACGAATACTCCTCGAATGTACCACTCAAGTGCGGTTTTGGTTCGTGACGGGAGGGTTCTGGTGGCGGGGAGTAACCCTCACGTGGGGTACAATTTCTCGCACGTGACTTTCCCCACCGACCTCAGCGTGGAAGCGTTTTCGCCGCCGTATTTGGAAGCGGCGTTTCGTAACGTGCGTCCGAGGATCGTTGGTCCGGAGTCAGGCACGAGGGTCGCGTATGGGCAGAAGGTGAAGGTTCGGGTCGACGTGGCGGCTGCTTTGGTTCGGAGTTTGGTTCGGGTGACGGTGCTGGCGCCGCCTTTTGCCACGCATTCGTTTTCGATGAATCAGAGGATGCTGGTTCTGGAACCTAGCCACGTCACGAACGTGGATGGACCAACAACGTTCGAACTTGAGGTTACAGCACCGGGTTCGCCCATTCTTGCACCACCCGGTTTTTATCTTCTGTTTGTGGTCCACCAAGAGATTCCAAGCGAGGGTATTTGGATCCAAATACTTTAA 1659 0.5558 MKLTFSILITTLLLAVKLPPPYSVVASAAGQWQLLHKTIGIVAMHMQLLHTDTVVIFDRTDFGLSNLSLAGGRCRHDPDEKVVKTDCTAHSVEYDVASNTFRPLFLQTNIWCSSAAVAADGTLVQTGGFNDGERTVRTFLPCATCDWREFPDGLAVRRWYATNQKLPDGRQIIIGGRRQFNYEFYPKSDATAKNTYSLPFLVQTNDPSEENNLYPFVFLNVDGTLFIFANNRAILLDYTKNAVVKTFPNIPGNDPRCYPSTGSAVLLPLRSKNPNFFSPEAEVLICGGAPRGAYTQAKKGTFIGALRTCARIKITDPNPTWVMETMPGGKGRLMSDMILLPNGNVLIVNGAGSGSAGWEFGRDPVLAPFVYNPDKEFGSRFEILNATNTPRMYHSSAVLVRDGRVLVAGSNPHVGYNFSHVTFPTDLSVEAFSPPYLEAAFRNVRPRIVGPESGTRVAYGQKVKVRVDVAAALVRSLVRVTVLAPPFATHSFSMNQRMLVLEPSHVTNVDGPTTFELEVTAPGSPILAPPGFYLLFVVHQEIPSEGIWIQIL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0095 552 Gene3D Immunoglobulins 444 552 IPR013783 -
Pvu1g0095 552 SUPERFAMILY Galactose oxidase, central domain 77 438 IPR011043 -
Pvu1g0095 552 Pfam Galactose oxidase-like, Early set domain 445 551 IPR015202 -
Pvu1g0095 552 Pfam Glyoxal oxidase N-terminus 44 288 IPR009880 -
Pvu1g0095 552 Gene3D - 26 441 IPR037293 -
Pvu1g0095 552 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 24 551 - -
Pvu1g0095 552 PANTHER SECRETED PROTEIN-RELATED 24 551 - -
Pvu1g0095 552 SUPERFAMILY E set domains 441 551 IPR014756 -
Pvu1g0095 552 CDD E_set_GO_C 441 551 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0095 Pvu-Chr1 786689 788347 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0095 1 786689 788347 Pvu1g0095 1 786689 788347 ECH
Pvu1g0095 1 786689 788347 Pvu9g0152 9 2352884 2354834 PCT
Pvu9g0153 9 2371879 2373576 Pvu1g0095 1 786689 788347 PCT