Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0094 ATGGCTCGTACCAAGCAAACCGCTCGCAAATCCACCGGCGGAAAGGCCCCGAGGAAGCAGCTCGCCACCAAGGCTGCGAGAAAATCTGCACCCACAACCGGTGGAGTGAAGAAGCCCCATCGTTATCGCCCTGGAACCGTTGCTCTTCGTGAGATCCGTAAATACCAGAAAAGTACTGAGCTTCTGATCCGCAAGCTTCCCTTCCAGCGTCTTGTTCGTGAAATCGCCCAAGATTTCAAGACTGATTTGAGGTTCCAGAGTCACGCTGTTCTTGCCCTTCAGGAAGCTGCTGAGGCCTATTTGGTTGGTTTGTTTGAAGATACCAATTTGTGTGCGATCCACGCCAAGAGGGTTACCATCATGCCCAAAGATATTCAACTCGCTCGCCGGATCCGTGGAGAACGTGCTTAG 411 0.5255 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0094 136 SUPERFAMILY Histone-fold 2 133 IPR009072 GO:0046982
Pvu1g0094 136 PANTHER HISTONE H3 1 136 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 ProSitePatterns Histone H3 signature 1. 15 21 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 Pfam Core histone H2A/H2B/H3/H4 1 132 IPR007125 GO:0003677
Pvu1g0094 136 PRINTS Histone H3 signature 3 17 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 PRINTS Histone H3 signature 17 31 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 PRINTS Histone H3 signature 34 55 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 PRINTS Histone H3 signature 58 75 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 PRINTS Histone H3 signature 80 98 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 PRINTS Histone H3 signature 98 114 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 PRINTS Histone H3 signature 114 135 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 PANTHER - 1 136 - -
Pvu1g0094 136 MobiDBLite consensus disorder prediction 1 43 - -
Pvu1g0094 136 Gene3D Histone, subunit A 2 136 IPR009072 GO:0046982
Pvu1g0094 136 SMART h35 34 136 IPR000164 GO:0000786|GO:0003677|GO:0030527
Pvu1g0094 136 ProSitePatterns Histone H3 signature 2. 67 75 IPR000164 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0094 Pvu-Chr1 778781 780196 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0094 1 778781 780196 Pvu1g0094 1 778781 780196 ECH