Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0093 ATGACCAGGGTCGAGTCAATGGAAGGTGTTGATCAGAGTAATATGAAACGAAATGGTTGTGTATTTGGTTCGTCATCGGGTGCAAATCTCAGACCCCCAAATCGATTGAATAATGCTGTGGCTATTAGTCAAATGGGTGTTGCTGAGAATCAGAAACCCTATGGTATACCACCCTCTTACCCTAACACAAATATTTCACCTTCTTCACCCTATCCTCAGTTTTTTGGCTCTCAATCCCATTCCAATTCGGTTTCTCAGCGTTTGGGTTCTCCCAATTTGAGTTCTGCTTCATCCCATTCCAGGTCTTTGTCTCAGCCCCCTTTTTTCTCTCTGGATTCCTTGCCCCCATTGAGTCCTTCTCCTTATAGAGAGCCCTCCCTTTCTGACCCAATTTCAACAGATGTGTCTGCTGAGGAAAGCTTGGTTAACCCACATGCCCCTTTGCCTAATCGTGGTCCTGCACTTCAGCTTGGCCATTCTCTTCCACCTCGGAAAGGACACAGGCGATCCAGCAGTGATTCCCCTTTGGGAATCTCTGATTTTATTCAGTCTGCCCCTCAGTTGGTTCCCTCCAGGACTTGGAGTGATCGTGATGGTTCTAGGGGAGGGAACTCGGGTTATGAGAAACCGATTCAGCTGGTGTTGAAGGAACCGATTAAGGATATGGACCGTGCTGATGGTTTTGGTGTGGAACCTATGGTTGGGAGGAAAGAGGATGATGCACTGGATGATTTGTTCAGTGCATACATGAATTTGGACAACATTGATGGTCTGAATTTTTCTGGTATGGAAGATAAGGATTTGGATAGCAGAACCAGTGGTTCCAAGACTGTTGAAAGCAGTGACAACGAAGTTGAGAGTCATGCAAATGGGAAAACAACCGGTGCTCAAGGGGCTAGTTCAAGCTGTTCAGAGGAGAGAAGGGAAGGAGTGAAGAGGAGCTCTGATGGAGACATTGCACCTGGTTCCCGACACCGGAGAAGTTTCTCATTGGACAGCTCCATTGGAAATTTCCACATTGGAGATGAATCACCTAAGCTTCCTCCTTTGCAAAACCGAGGTGGTCAACACTCTCCTAGCAATTCGATGGATGGTAAGACATCTGAAACAAGCATCGAGTTTGGAAATGGTGAGTTCAGCTCAGAGGAGCTAAAGAAAATAAAGGAGAATGATAAACTTGCTGAAATTGCCATGGCTGATCCTAAACGTGCAAAAAGGATTTTGGCGAATCGGTTATCTGCTGCTCGCTCAAAAGAGCGGAAGATGCGATACATTTCTGAATTGGAGCTGAAAGTCCAAACACTTCAGACAGAGACAACCACATTGTCTACTCAATTTACCAAATTACAGATGGATAATTCTGAGCTTAAAAGTGAGAATAATGAGTACAAATTGAGGATTCAAGCCTTCGAGCAGCAGTCCCAACTGAAAGATGCTCTGAATGAGACATTGGATGCTGAAGTGCGGCGTTTAAGACGCATGGTTGCAGAACTTGGCGGAGAGACCCTCCTCTCGAGTCGCATGGCTCAACAGCTTGCTATTAGCCAACAAATGTTCCCATTACAGCAGCACCAGCAGCACCCTAACCAGCTTAGACATGCTCAACTGCACAATAACCATTCTCAGGAACAGACACAGACTCAGTCACAGCGCCAGAATGGCAAAGCAACAGCCTACTGA 1680 0.4607 MTRVESMEGVDQSNMKRNGCVFGSSSGANLRPPNRLNNAVAISQMGVAENQKPYGIPPSYPNTNISPSSPYPQFFGSQSHSNSVSQRLGSPNLSSASSHSRSLSQPPFFSLDSLPPLSPSPYREPSLSDPISTDVSAEESLVNPHAPLPNRGPALQLGHSLPPRKGHRRSSSDSPLGISDFIQSAPQLVPSRTWSDRDGSRGGNSGYEKPIQLVLKEPIKDMDRADGFGVEPMVGRKEDDALDDLFSAYMNLDNIDGLNFSGMEDKDLDSRTSGSKTVESSDNEVESHANGKTTGAQGASSSCSEERREGVKRSSDGDIAPGSRHRRSFSLDSSIGNFHIGDESPKLPPLQNRGGQHSPSNSMDGKTSETSIEFGNGEFSSEELKKIKENDKLAEIAMADPKRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSENNEYKLRIQAFEQQSQLKDALNETLDAEVRRLRRMVAELGGETLLSSRMAQQLAISQQMFPLQQHQQHPNQLRHAQLHNNHSQEQTQTQSQRQNGKATAY* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0093 559 MobiDBLite consensus disorder prediction 125 139 - -
Pvu1g0093 559 MobiDBLite consensus disorder prediction 172 200 - -
Pvu1g0093 559 PANTHER BZIP TRANSCRIPTION FACTOR 75 557 - -
Pvu1g0093 559 MobiDBLite consensus disorder prediction 1 35 - -
Pvu1g0093 559 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 400 463 IPR004827 GO:0003700|GO:0006355
Pvu1g0093 559 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 75 557 - -
Pvu1g0093 559 MobiDBLite consensus disorder prediction 287 304 - -
Pvu1g0093 559 MobiDBLite consensus disorder prediction 266 369 - -
Pvu1g0093 559 Coils Coil 446 473 - -
Pvu1g0093 559 MobiDBLite consensus disorder prediction 538 559 - -
Pvu1g0093 559 SMART brlzneu 398 462 IPR004827 GO:0003700|GO:0006355
Pvu1g0093 559 SUPERFAMILY Leucine zipper domain 402 457 IPR046347 GO:0003700|GO:0006355
Pvu1g0093 559 MobiDBLite consensus disorder prediction 305 325 - -
Pvu1g0093 559 Coils Coil 418 438 - -
Pvu1g0093 559 Gene3D - 400 462 - -
Pvu1g0093 559 MobiDBLite consensus disorder prediction 50 209 - -
Pvu1g0093 559 Coils Coil 477 501 - -
Pvu1g0093 559 MobiDBLite consensus disorder prediction 56 111 - -
Pvu1g0093 559 CDD bZIP_plant_RF2 403 475 IPR044759 GO:0003700|GO:0006355
Pvu1g0093 559 MobiDBLite consensus disorder prediction 351 369 - -
Pvu1g0093 559 Pfam bZIP transcription factor 402 460 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0093 Pvu-Chr1 762540 765991 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu1g0093 bZIP_1 1.9e-10 CL0018