Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu1g0088 | ATGTCGGTGGCTGAAACTGCTTGTTCGTACGCATCTCTCATCCTTCACGATGAAGGCATCTCCGTCAGTGAAGACAATATCGTCACCTTGTTGAAAACTGCGAAGGTTCAAGTCGATTCTTTTTGGCCTACCCTGTTTGCTAAACTTGCCCAGAAGAAAAATCTTGGCGACTTGATAGCAAATGCTGCGGGTGGTGGGGCACCAGTTGCTGTTGCAGCTGCCCCGGTGGGTGCTGCAGGTGGAGGTGCTGCTGCCGCCGCCGCCGCCCCTGCTGCTGAGGAGAAAAAGAAGGAAGAACCTGAAGAAGAGAGTGATGATGATATGGGATTCGGCTTGTTCGATTAG | 345 | 0.5217 | MSVAETACSYASLILHDEGISVSEDNIVTLLKTAKVQVDSFWPTLFAKLAQKKNLGDLIANAAGGGAPVAVAAAPVGAAGGGAAAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu1g0088 | 114 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN P1 | 1 | 107 | - | - | |
| Pvu1g0088 | 114 | Pfam | 60s Acidic ribosomal protein | 22 | 113 | - | - | |
| Pvu1g0088 | 114 | Hamap | 50S ribosomal protein L12 [rpl12]. | 6 | 114 | IPR027534 | GO:0003735|GO:0005840|GO:0006414 | |
| Pvu1g0088 | 114 | MobiDBLite | consensus disorder prediction | 99 | 114 | - | - | |
| Pvu1g0088 | 114 | CDD | Ribosomal_P1 | 5 | 61 | - | - | |
| Pvu1g0088 | 114 | Gene3D | - | 1 | 62 | IPR038716 | - | |
| Pvu1g0088 | 114 | MobiDBLite | consensus disorder prediction | 87 | 114 | - | - | |
| Pvu1g0088 | 114 | PANTHER | 60S ACIDIC RIBOSOMAL PROTEIN | 1 | 107 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu1g0088 | Pvu-Chr1 | 732706 | 733742 | Dispersed |