Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0087 ATGGGTTCAGTTTCTCTGAAAATTGGAGATGGAACAGCCAGATTCCAAAGAGCAACACTGTGTTCTTCAGCTGTTAACATTCTCATGATTTTCTCTGTCATCACCACCAACCTCTTTGCTCTCTACGCCTTCACTGCTTCCCCTAAACACCCCCATCACCTTCTCCACCATCATGCTCACAAGAATATTTCTCTCATCTCGGAGCAGGTCTCACTCATTCTCAGAGAGATCGATTTGTCCCAGAAGAAACTGGCCCAGATGGAGAAAGAGCTTCTGGGCTACGAAAGCATTGATCTTTCAAGGCCCAACATTGCATCCGAGCTCAAGGTCTTCCTCCAGCGCCAAGAGCTCCCTCTGGGGAAAGATTCAAGAACTGGGATCACTGAGATGGTGCCATCTGTGGGTCACACCTGTGAGAAAAATTCAGACCTGCTGTCTCAGTTCATGAGTTACAAGGTTTTTGGAGCTTGCCCTGATGATTGGAGTGTGGCACAGAAGCTGATCTTAAAAGGGTGTGAGCCTTTGCCTAGGAGGAGGTGTTTTGCAAAGACTGTTTCCAAGGTAGGTTTGTACCCCTTTCCAGATTCTCTTTGGAAGCCTGTTGGTAATAAGACTGTTAACTGGAGTGGTCTTGGTTGTAAGAATTTTGAGTGTTTGAATAGTAAAAGGCTGAGTAGGGAGTGCATTGGTTGCTTTGATTTGGTCCATGGCAATGAGAATGTTAGATTTGTTAAGGGTAAGAGTAAGAACGATTTTCTGGTTGATGATGTGTTGGCCTTGGGAGGTGGAGGGGTTAGAATAGGGCTTGACATTGGTGGGGGGTCTGGATCCTTTGCTGCTAGAATGGCTGATAGGAATGTTACTGTGGTTACTAACACCCTCAATGTTGATGCCCCATTCAGTGAATTCATTGCTGCAAGAGGGCTTTTTCCTCTTTACTTGAGCTTGGATCATAGGTTTCCTTTCTATGACAATGTGTTTGACTTGGTTCATGCTTCAAGTGGCTTGGATGTTGGAGGAAAGAGTGAGAAATTGGAGTTTTTGATGTTTGACATTGACAGAGTTTTGAGAGCAGGTGGTTTGTTCTGGCTGGATAACTTCTTTTGTGCCAATGAAGAGAACAAGCAAGCTTTGACTCGGTTGATTGAAAGGTTTGGATATAAGAAGTTGAAATGGGTTGTGGGAGAGAAGATTGACAGTGTTGGGTCTGGCAAACCTGAAGTTGTGTTATCTGCTGTTCTTCAGAAACCTGTTAGAGTTTAG 1263 0.4458 MGSVSLKIGDGTARFQRATLCSSAVNILMIFSVITTNLFALYAFTASPKHPHHLLHHHAHKNISLISEQVSLILREIDLSQKKLAQMEKELLGYESIDLSRPNIASELKVFLQRQELPLGKDSRTGITEMVPSVGHTCEKNSDLLSQFMSYKVFGACPDDWSVAQKLILKGCEPLPRRRCFAKTVSKVGLYPFPDSLWKPVGNKTVNWSGLGCKNFECLNSKRLSRECIGCFDLVHGNENVRFVKGKSKNDFLVDDVLALGGGGVRIGLDIGGGSGSFAARMADRNVTVVTNTLNVDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVHASSGLDVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCANEENKQALTRLIERFGYKKLKWVVGEKIDSVGSGKPEVVLSAVLQKPVRV* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0087 420 Coils Coil 70 90 - -
Pvu1g0087 420 Gene3D Vaccinia Virus protein VP39 250 401 IPR029063 -
Pvu1g0087 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 249 390 IPR029063 -
Pvu1g0087 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 420 - -
Pvu1g0087 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 388 IPR004159 GO:0008168
Pvu1g0087 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0087 Pvu-Chr1 728243 729505 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0087 1 728243 729505 Pvu1g0087 1 728243 729505 ECH
Pvu1g0087 1 728243 729505 Pvu9g0159 9 2432182 2434086 PCT