Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0083 ATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCGGACAAGGCTGTGATAGATAAAGCAGCTGCAGAATTGGACTCTGCTGCGGTTGCGGCCACTCAGAAGCCGAGCCACGTCCAAATCTCAGTAGAGTCATATTCTCATCTGACTGGTTTGGAGGATCAAGTGAAGGCATATGAAGAAAACGTTCAGACGCTGGAGGATGATATCAAGGACTTAAATGAAAAACTGTCTGCGGCTAATTCGGAGATAAATACAAAGGAAAGTCTGGTAAAACAGCATGCTAAAGTAGCAGAAGAGGCTGTCTCAGGCTGGGAAAAGGCTGAAGCAGAAGCTTTAGCTTTGAAGAACCATCTGGAGTCTGTCACTCTTGCAAAACTCACTGCTGAGGATCAGGCGTCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTAAAGGAAGAACATGAACAGAAATTACAAGAAGTTGCTCTCACTAAAACCAAGCAATTGGACAAGATTAAGGGTGAGCTTGAGGCTAGGATAGCAAGCTTTGAACAAGAACTCCTCAGGTCTGCTTCCGACAATGCGGCTCTGTCAAGGTCCTTGCAAGAGCGCTCTAACATGATAATCAATTTAAGGGAAGAAAAAGCACACGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATTGAATCATGTGAAAGAGAAATCAATTCACTCAAATATGAGGTTCATGTTATTGCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCACATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGGAAAAAGTTACCCGGTCCAGCTGCACTTGCGCAAATGAAGCTAGAAGTTGAAAGTCTTGGTCGAGAATATGGAGAAACTCGACTAAGGAAGTCTCCTGTCAAACCCCCTAATTCTCACATGTCTCCAATGCCTGGGTTCTCCCTGGATAATGCTCAGAAATTCCACAAAGATAATGAATTTCTTACCGAGCGATTGCTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAATAGTGAACTGCAGGCTTCAAGGAGTATGTTTGCGAAAACTTTGAGTAGACTTCAAATTTTGGAAGCACAAGTTCAGACAAGTAATCAGCAGAAGGGATCTCCTAAATCCATCATAAATGAAAGCATTTTCAGTCAAAATGCCAGCAATGCACCAAGCTTGATCTCCATGTCCGAAGATGGCAATGATGATGTGGGAAGTTGTGCTGAGTCTTGGTCTACAGCAATTCTCTCTGATCTATCCCAATTCCCTAAAGGAAAGAATACCGAGGAATTGAGCATATCTGATACCACTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAATTGGCTCGATTATCAAATGACTGCGGTGAAGTTTCAGGTACTTCAAAAAATATAGCAAATGAAACTGTGACCGATGATGTATCAGAAGTCAGCACTGGGAAATATGTTCCCTCTAACTCCCAAGAGAATAGTGATCCAAATCCATTGCCAAGTGATGTGTCTTCTGCTGAGGAGTTATCAGCACCTGATCCCCAATCTGATGTTCCTAGCTCGTCACTAGCAGAGCTTCGATCAAGAATATTATCAGTTTTTGAGTCAATGGCTAAAGATGCTGATATGGAGAAGATATTGAAGGATATTAAACACGTTCTTGAAGATGCATGTGACGTTTCAATCCAGGGCTCTGTATCTGCCGTTCCTCATTATGTCATGCCTTCTGATGTTACGTGTGATAAGCAGGGTAACACTGAAGATGTTGCCTTAAATGCAGAAAAAGAAACTATTTCATCGCAGCAACCTCCAGAGTATGGGCAAATAACTACGGATCTAGAAGCCGCAATGTCTCAAATTCATGACTTTGTAGTGCTCCTAGCCAAAGAAGCAATGGCAGCGCATGATATATCTTCTGATGCAGATGGAATAAGCCAAAAAATGAAGGAGTTCTCTGACACTTTTAATAAAGTTACCTCCAATGAAGAAAATTTGCCACAGTTTGTTCTGGACTTGTCTAGTGTTCTAGCCAAAGCAAGTGAATTCAGATTTAATATTCTTGGTTACAAGGGTACGGAAGCTGAAACTAATAGTCCTGATTGCATAGATAAGATTGCTCTGCCTGAAAATAAGTTAGTTCAAGACAATTCTTCAGGAGAGAGATATCAAAATGGCCATTCCCATATTCTTAATCCCTGTTCTGATCCTGAGATTCCCGATGATGGAAATTTGGCCTCAGGCTATGAATCAAATGCCACGACGAAGAAGTTCTCAATGGAGGAGTTCGAAGAGCTGAAGTTAGAGAAAGAGAAGGCAATTGTGGATCTATCAAAATGTGCTGAAAATCTTGAAATGACGAAGTCTCGGTTACTAGAGACAGAGCAACATCTAGCTGAAGTTAAATCACAGATGGCTTCTGCTCAAAGATCGAATAGCCTGGCTGAGACACAGCTAAAATGTATGACAGAATCGTACAGATCAATTGAAACACGTGCAAAGGAGTTTGAGACTGAGCTTAATCATCTGCGAATGAAGACAGAAACTTTAGAGAATGAACTGGAAGATGAAAAGAGGGCTCATGAAGCAGCTTTGGCCAAATACAAGGAGCTAGAAGAACAACTACAAAGGAGTGAGAGCTCAGCTGCTGATAATGACATTAAGGCTAAGCAGGAGAGAGACTTGACAGCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATATTTCTTCTTGGCAAGCAGTTTAAAGCTCTGCATCCTCAAACAGAGCCAATGGGATCTCCTTGTTCAAAGGCTGAAGGCTTCACAATGGGATCTCCTTATTCAAAGGCTGAAGGCTTCACAGAGCGTGAACCTAATAGCCCAAGTTTGCAAGATCAAGCAGAAATAGACAGTGCTAATTCTGCATTTGTGCAACGATTGGGTGGAGATTCCCCTTTACATTTTACCAACAGTTTATATAGTCCATCAGATAACGAGTCAATCTTTCCAGCCATATCTTCTGTACAGAATCCAAACCACAGGCCTACTAAGTCATCCTCATCCTCAGCTTCTTCCACTCCAACTCCAGACAAACACAGAGGTTTTAGTAGGTTCTTTTCTTCAAAAGGGAAACACGGTCATTGA 3234 0.4215 MDRRWPWKKKSSDKAVIDKAAAELDSAAVAATQKPSHVQISVESYSHLTGLEDQVKAYEENVQTLEDDIKDLNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLAKLTAEDQASQLDGALKECMRQIRNLKEEHEQKLQEVALTKTKQLDKIKGELEARIASFEQELLRSASDNAALSRSLQERSNMIINLREEKAHAEAEIELLKGNIESCEREINSLKYEVHVIAKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGREYGETRLRKSPVKPPNSHMSPMPGFSLDNAQKFHKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMFAKTLSRLQILEAQVQTSNQQKGSPKSIINESIFSQNASNAPSLISMSEDGNDDVGSCAESWSTAILSDLSQFPKGKNTEELSISDTTKKLELMDDFLEVEKLARLSNDCGEVSGTSKNIANETVTDDVSEVSTGKYVPSNSQENSDPNPLPSDVSSAEELSAPDPQSDVPSSSLAELRSRILSVFESMAKDADMEKILKDIKHVLEDACDVSIQGSVSAVPHYVMPSDVTCDKQGNTEDVALNAEKETISSQQPPEYGQITTDLEAAMSQIHDFVVLLAKEAMAAHDISSDADGISQKMKEFSDTFNKVTSNEENLPQFVLDLSSVLAKASEFRFNILGYKGTEAETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNPCSDPEIPDDGNLASGYESNATTKKFSMEEFEELKLEKEKAIVDLSKCAENLEMTKSRLLETEQHLAEVKSQMASAQRSNSLAETQLKCMTESYRSIETRAKEFETELNHLRMKTETLENELEDEKRAHEAALAKYKELEEQLQRSESSAADNDIKAKQERDLTAAAEKLAECQETIFLLGKQFKALHPQTEPMGSPCSKAEGFTMGSPYSKAEGFTEREPNSPSLQDQAEIDSANSAFVQRLGGDSPLHFTNSLYSPSDNESIFPAISSVQNPNHRPTKSSSSSASSTPTPDKHRGFSRFFSSKGKHGH* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0083 1077 Coils Coil 200 241 - -
Pvu1g0083 1077 MobiDBLite consensus disorder prediction 1029 1077 - -
Pvu1g0083 1077 Coils Coil 132 185 - -
Pvu1g0083 1077 SUPERFAMILY Tropomyosin 797 955 - -
Pvu1g0083 1077 MobiDBLite consensus disorder prediction 970 996 - -
Pvu1g0083 1077 Pfam Filament-like plant protein, long coiled-coil 86 961 IPR008587 -
Pvu1g0083 1077 Coils Coil 246 283 - -
Pvu1g0083 1077 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 973 1077 - -
Pvu1g0083 1077 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 972 - -
Pvu1g0083 1077 MobiDBLite consensus disorder prediction 1029 1061 - -
Pvu1g0083 1077 Coils Coil 48 89 - -
Pvu1g0083 1077 PANTHER FILAMENT-PLANT-LIKE PROTEIN 973 1077 - -
Pvu1g0083 1077 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 972 - -
Pvu1g0083 1077 Coils Coil 819 943 - -
Pvu1g0083 1077 Coils Coil 343 370 - -
Pvu1g0083 1077 MobiDBLite consensus disorder prediction 495 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0083 Pvu-Chr1 642732 648847 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0083 1 642732 648847 Pvu1g0083 1 642732 648847 ECH
Pvu1g0083 1 642732 648847 Pvu9g0161 9 2480636 2486528 PCT