Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0081 ATGGAAACTGAAGAACAAGGCAGAACAAAGATGAAGTCAAGGTTCAGACGTATCTGTGTCTTCTGTGGCACCAGCCCTGGCAAGAACCCTAGCTACCAACTTGCTGCTGTCCAACTAGGCAAACAACTTGTGGAGAAGAACATCGACTTGGTTTATGGAGGAGGAAGCATTGGGTTGATGGGGCTAATCTCACAAGTGGTCTTTGATGGTGGACGCCACGTGTTAGGGGTGATTCCCACCACTCTTATGCCAAGAGAGATAACTGGAGAGACAGTAGGAGAAGTTAGAGCAGTGTCAGGAATGCACCAACGCAAAGCAGAAATGGCTCGACAAGCTGATGCATTCATTGCTCTCCCAGGTGGATATGGCACTCTGGAAGAACTACTTGAAGTTATCACTTGGGCTCAACTAGGAATCCATGATAAACCAGTGGGGTTGTTGAACGTGGATGGCTACTACAACTCGTTGCTGTCATTCATGGACAATGCTGTGGACGAAGGTTTCATCACACCACCTGCCCGTCACATTATTGTCTCTGCCCAAACTGCCCAAGACCTCATCTCCAACCTTGAGGAATATGTTCCGAAGCACAGTGGTGTGGCACCAAAGCAGAGTTGGGAGATGGAACAACAGTTATAA 639 0.4804 METEEQGRTKMKSRFRRICVFCGTSPGKNPSYQLAAVQLGKQLVEKNIDLVYGGGSIGLMGLISQVVFDGGRHVLGVIPTTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFMDNAVDEGFITPPARHIIVSAQTAQDLISNLEEYVPKHSGVAPKQSWEMEQQL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0081 212 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 10 210 - -
Pvu1g0081 212 Pfam Possible lysine decarboxylase 60 189 IPR031100 -
Pvu1g0081 212 Gene3D - 4 192 - -
Pvu1g0081 212 PANTHER LOG FAMILY PROTEIN YJL055W 10 210 - -
Pvu1g0081 212 TIGRFAM TIGR00730: TIGR00730 family protein 17 193 IPR005269 GO:0009691|GO:0016787
Pvu1g0081 212 SUPERFAMILY MCP/YpsA-like 14 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0081 Pvu-Chr1 616683 620819 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0081 1 616683 620819 Pvu1g0081 1 616683 620819 ECH
Pvu1g0081 1 616683 620819 Pvu9g0164 9 2660091 2663107 PCT