Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0080 ATGGCAGTCACATTCTACGACCTTAGCTCTGCCTCTGGGTTGAAGAAGCTTGACGAGTACCTTCTCCCACGCAGTTACATCACCGGGTACCAAGCTTCAAAGGATGATCTCACTGTCTATGCAGCTTTGCCAACTGCTCCATCAGCTGAGTATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGTGAGGGTTCCGGTGTCACTGTTGAGGGATCTCTTGTTGCTGAGCCTGTTGCTACTCCCCCAGCTGCTGATACTAAGGCTGCTGCTGCTGTGGATGACGACGACGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAGGAAGAGAAGAAGGCAGCTGAGGAAAGGGCAGCTGCAGTGAAGGCATCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAACCATGGGACGATGAAACCGACATGAAGAAGCTCGAGGAAGCAGTGAGATCTGTTACCATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCCGTTGGGTACGGCATCAAGAAACTGCAAATTATGCTTACTATCGTGGATGACCTAGTTTCTGTCGACGATCTTATTGAGGAACGTCTCACAGTTGAGCCCGTCAATGAATATGTCCAGAGTTGTGACATTGCAGCCTTCAATAAAATTTAA 696 0.477 MAVTFYDLSSASGLKKLDEYLLPRSYITGYQASKDDLTVYAALPTAPSAEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSLVAEPVATPPAADTKAAAAVDDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVTMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDDLIEERLTVEPVNEYVQSCDIAAFNKI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0080 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pvu1g0080 231 Coils Coil 114 134 - -
Pvu1g0080 231 Gene3D - 4 78 - -
Pvu1g0080 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pvu1g0080 231 Gene3D - 135 231 IPR014717 -
Pvu1g0080 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 231 - -
Pvu1g0080 231 CDD EF1B 140 231 IPR014038 GO:0003746|GO:0006414
Pvu1g0080 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Pvu1g0080 231 SUPERFAMILY GST C-terminal domain-like 11 67 IPR036282 -
Pvu1g0080 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Pvu1g0080 231 MobiDBLite consensus disorder prediction 89 110 - -
Pvu1g0080 231 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 1 231 - -
Pvu1g0080 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0080 Pvu-Chr1 611572 613854 Transposed