Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0074 ATGGCTCTCTTAACTTCCTTGCCTGAACACTCCACCACCCCCAAACGCCACAAACGAAAACCACAGCAGCAGCAACACCAGAAGCAGAAGCAGAAGCAGAAACAGAAACCACCCTCTTCATGGGATCAAATCAAGAACCTCTTAACCTGCAAACAGATGGAAGGTTCGAGGGTTCACGACCCTTCAAAAGGGTACTCGAGAATAGGGTCTTCTTGCAGCTCCATATGCAGCTTCAGAGACGTTGTTCATGGGAACACACGTGTGGTGCATAGGTCTGATAACTCTTCACCAGAGAGTAGTTCTCTGGGTCAGGAAACTGGTTTACTCACCAGAAAACCGGTAACCGCTTCTACACGCTCCACCGCCGCCAAATCAAACGCCGGAACAACCTACACGTCATCGTCTTCCAGGGGGATGCAATTCAGAAAGCTTTCTGGCTGTTATGAATGTCACATGATCATTGACCCCAGCAGGTTACCGGTTGCAAGGAGCACTGTGTGTGCTTGCTCTCACTGTGGTGAAGTCTTCCCTAAAATGGAGAGTTTGGAGCTTCATCAAGCTGTTCGTCATGCCGTTTCGGAGCTGGAACCGGAGGATTCGGGTAGGAACATAGTGGAAATAATATTCAAATCGAGCTGGTTGAAGAAGGATAATCCGATATGCAAGATCGAACGGATACTGAAAGTGCACAATACCCAACGCACCATCCAACGGTTCGAGGAGTGCAGGGACACGGTAAAGAACCGTGCGCTGAGCAGCACCAAGAAAAACCCCAGGTGCGCAGCCGACGGCAACGAACTCTTGCGGTTCCACTGCACCACCTTAACGTGCGCACTGGGCGCACGTGGGTCATCCTCGCTGTGCGCCTCCGTACCCGGCTGCGGTGTCTGCACAATCATCAGGCACGGTTTCCAAGGTGGCGGCGGAGGGGACCACGCGAAGGTCAAGGGCGTGGGAACCACCGCCAGCAGCGGTAGGGCACACGACTCCGTCGTGTGCGGCGACGGCACGCGGAGGGCCATGCTGGTGTGCAGGGTGATCGCGGGGCGCGTGAAGCGCGTGGCGGAGGACACGCCGCCGTCGGAGGAGGAGCACGTGTCGGTTGCGTCCTATGATTCCGTAGCCGGGTACGCTGGAATCTACTCGAATCTCGAGGAGTTGGTTGTTTTCAATCCAAAGGCTATTCTTCCTTGTTTCGTGGTAATTTATAAAGTGCCTTCGTGTTAG 1227 0.5412 MALLTSLPEHSTTPKRHKRKPQQQQHQKQKQKQKQKPPSSWDQIKNLLTCKQMEGSRVHDPSKGYSRIGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSSLGQETGLLTRKPVTASTRSTAAKSNAGTTYTSSSSRGMQFRKLSGCYECHMIIDPSRLPVARSTVCACSHCGEVFPKMESLELHQAVRHAVSELEPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTQRTIQRFEECRDTVKNRALSSTKKNPRCAADGNELLRFHCTTLTCALGARGSSSLCASVPGCGVCTIIRHGFQGGGGGDHAKVKGVGTTASSGRAHDSVVCGDGTRRAMLVCRVIAGRVKRVAEDTPPSEEEHVSVASYDSVAGYAGIYSNLEELVVFNPKAILPCFVVIYKVPSC* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0074 408 MobiDBLite consensus disorder prediction 89 135 - -
Pvu1g0074 408 Gene3D - 190 405 - -
Pvu1g0074 408 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 195 IPR013087 -
Pvu1g0074 408 MobiDBLite consensus disorder prediction 1 42 - -
Pvu1g0074 408 MobiDBLite consensus disorder prediction 13 33 - -
Pvu1g0074 408 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 25 405 - -
Pvu1g0074 408 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 25 405 - -
Pvu1g0074 408 SUPERFAMILY ADP-ribosylation 192 404 - -
Pvu1g0074 408 ProSitePatterns Zinc finger C2H2 type domain signature. 167 190 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0074 Pvu-Chr1 566703 569916 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu1g0074 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0074 1 566703 569916 Pvu1g0074 1 566703 569916 ECH