Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0073 ATGATGTCTGTTACAGTCGCTGCCGCCACTTCCTCCGCCGCAGGCTCCTATCTTCCACGGACGCCACGGCGGAGTTTCATTGTGGCTCTCCGATCTGACGTGTCAGTTACCCCAACGAGAATATTGACGAAACTGAAACACGAGTGTGCCACTCCTCTGCCCCTTCTTCAGCAAGTGGCCAAAGCCATGTCTGATGATATGCGAGCTGGGCTTGGGCTTGGGCTTGGGCCCGAGCCCGGGCTTCCCATGATACCCACCTATGTTGAAAATCTTCCCACTGGGAATGAGAAAGGGTTGTTTTATGCGTTGGATCTTGGTGGAACCAACTTCCGTGTGCTGAGGGTGCAGTTGGGTGGGAAAGATGAGCGTGTCATCCACACGGAGTTTGATCAAGTTTCTATACCACAACACCTCATGTCTTCTACATCTCAGGAGCTGTTTGATTTCATTGCTTCGGGGGTTGCAAAATTTGCGTCGAAGGAGGATGCTAGATTTCATATATCACCGGGAAGAAAGAGAGAGATTGGGTTCGCGTTTTCATTTCCTGTCAAGCAGACATCTATTGATTCTGGCATACTAATCAAGTGGACAAAGGGTTTTGCAGTCTCTGGAACAGCAGGAAGAGATGTGGTTGCTTGTCTGAATGAGGCAATGGAAAGACAAGGAATAGATATGCGAGTTTCTGCTCTGGTGAATGATGCTGTGGGAACATTAGCTGGAGCAGAATACTGGGACAATGATGTTGTGGCTGCTGTCATTTTGGGTACTGGAACCAACGCTTGCTATGTTGAGCAGATCAGTGTCATTCCTAAGTTACAGGGTCATGCCTCTTCTTCTGGCAAAATGATCATTAGCACTGAGTGGGGAGCTTTCTCAAACAGTCTTCCTTCAACCGAGTTTGACAGGGAAATGGATGCAGCTACCATCAATCCAGGTGAGCAGATCTTTGAAAAGACAATCTCAGGACTGTATCTAGGCGAAATTGTTAGACGAGTGCTACTCAAAATGACTAAAGAGGAGGGTTTGTTTGGCAAATCTGTCCCACAAAAACTATCTACACCATTCATACTCGGGACCCCAGATCTGTGTGCCATGCAGCAAGACTTTTCTGGCGATTTACATGCAGCTGGGTCCCTCCTCTATGATATACTAGGGGTTGAATCCAATTTAAGTGAAAGAAAAACAGTTTTAGAGGTTTGTGAGACTATTGTAAAGAGAGGTGGGAGGTTAGCTGGTGCAGGAATTGTGGGGATTCTACAGAAAATGGAAGAGGATCAGAGAGGTCTCATCTTTGGCAATGGGAAGAGAAGTGTTGTTGCCATAGATGGTGGCTTATACGAAAAGTATCCTCAATACAGGGCTTATTTGCAAGATTCAGTGAAAGAGCTGCTAGGGACAGAAAACTCAAACAATGTGGTGATAGAACATACAAAAGATGGTTCTGGCATAGGCTCTGCTCTGTTGGCTGCTTCAAACTCCATCTACAAACAAGATTTATAG 1500 0.4633 MMSVTVAAATSSAAGSYLPRTPRRSFIVALRSDVSVTPTRILTKLKHECATPLPLLQQVAKAMSDDMRAGLGLGLGPEPGLPMIPTYVENLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDERVIHTEFDQVSIPQHLMSSTSQELFDFIASGVAKFASKEDARFHISPGRKREIGFAFSFPVKQTSIDSGILIKWTKGFAVSGTAGRDVVACLNEAMERQGIDMRVSALVNDAVGTLAGAEYWDNDVVAAVILGTGTNACYVEQISVIPKLQGHASSSGKMIISTEWGAFSNSLPSTEFDREMDAATINPGEQIFEKTISGLYLGEIVRRVLLKMTKEEGLFGKSVPQKLSTPFILGTPDLCAMQQDFSGDLHAAGSLLYDILGVESNLSERKTVLEVCETIVKRGGRLAGAGIVGILQKMEEDQRGLIFGNGKRSVVAIDGGLYEKYPQYRAYLQDSVKELLGTENSNNVVIEHTKDGSGIGSALLAASNSIYKQDL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0073 499 CDD NBD_sugar-kinase_HSP70_actin 102 264 - -
Pvu1g0073 499 ProSiteProfiles Hexokinase domain profile. 36 490 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Pvu1g0073 499 PRINTS Hexokinase family signature 101 117 - -
Pvu1g0073 499 PRINTS Hexokinase family signature 175 200 - -
Pvu1g0073 499 PRINTS Hexokinase family signature 227 243 - -
Pvu1g0073 499 PRINTS Hexokinase family signature 250 264 - -
Pvu1g0073 499 PRINTS Hexokinase family signature 314 336 - -
Pvu1g0073 499 PRINTS Hexokinase family signature 396 418 - -
Pvu1g0073 499 PRINTS Hexokinase family signature 475 491 - -
Pvu1g0073 499 Gene3D - 62 478 - -
Pvu1g0073 499 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 22 495 - -
Pvu1g0073 499 Gene3D - 86 489 - -
Pvu1g0073 499 Pfam Hexokinase 43 243 IPR022672 GO:0005524|GO:0005975|GO:0016773
Pvu1g0073 499 SUPERFAMILY Actin-like ATPase domain 33 245 IPR043129 -
Pvu1g0073 499 Pfam Hexokinase 250 490 IPR022673 GO:0005524|GO:0005975|GO:0016773
Pvu1g0073 499 PANTHER HEXOKINASE 22 495 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Pvu1g0073 499 SUPERFAMILY Actin-like ATPase domain 247 492 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0073 Pvu-Chr1 558249 561987 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0073 1 558249 561987 Pvu1g0073 1 558249 561987 ECH