Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0072 ATGATCCGATTCATTCTGTTGCAGAACAGACAGGGCAAGACTCGTCTTGCCAAATACTACGTTCCTCTTGAGGATTCCGAGAAGCACAAGGTCGAATACGAGGTTCATCGACTCGTCGTAAACAGAGACCCTAAGTACACCAATTTCGTCGAGTTTCGTACGCACAAGATAATATACAGGCGATACGCTGGCTTATTTTTCTCACTCTGTGTTGATATCACTGATAATGAATTGGCATACTTAGAGTGCATTCATTTGTTTGTGGAAATACTGGATCACTTCTTCAGCAATGTGTGTGAGCTTGATTTGGTTTTTAACTTCCATAAGGTCTATCTTATACTTGATGAATTCATTCTAGCGGGTGAACTGCAAGAAACAAGCAAGAAGGCTATCATTGAGAGAATGGGGGAATTAGAAAAACTGGAGTGA 429 0.4103 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKIIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKAIIERMGELEKLE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0072 142 PANTHER AP COMPLEX SUBUNIT SIGMA 2 142 - -
Pvu1g0072 142 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 142 IPR016635 GO:0015031
Pvu1g0072 142 SUPERFAMILY SNARE-like 1 136 IPR011012 -
Pvu1g0072 142 PIRSF AP_complex_sigma 1 142 IPR016635 GO:0015031
Pvu1g0072 142 CDD AP2_sigma 1 141 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
Pvu1g0072 142 Pfam Clathrin adaptor complex small chain 1 141 IPR022775 -
Pvu1g0072 142 Gene3D - 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0072 Pvu-Chr1 555240 557704 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0072 1 555240 557704 Pvu1g0072 1 555240 557704 ECH