Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0065 ATGATTCCTGATTCAGAAACAAGCACTTTTAACGAAGCCATGTCAGAGGAAGAAGTGGCACCAAATATCCAGCACTTGTTTCCCTACTCTGATGAAAGCTTCTTCCTTTCAAATACCCTTTTGGAAAACTACATTGATCCAAATGCTGCTTTTCTCTATCCTTCGGAAATTCACTCTCCTTTTGATCCTTTCATTTCACTCCCTCATGAAGATTACAATCATTTCCCCTGCTCAAAACGCCAAAAGCTCTGCTTCGAGGAACAACAAGTACTACTACATTCACAGGACCTTACACCACCAACAATAGATGAGTTTGGTAATTGTTACTCTTTTCAATCTGAAGAGACACAACAGCAGCAATTATTTTGCATGGATGAGGAGAATGGTAAGGAAAGAACCATATATCCACAGAGTGTTGCTGCAAGAGAAAGAAGAAGAAAGATTACGAACAAGACTCAAGAGCTTGGTAAGTTGGTTCCTGGTGGAACAAAAATGAACACAGCTGATATGCTGAATGCAGTTGCAAAGTATGTTAAGTTCCTTCAAGCCCAAGTTGGAATGCTTGAACTCATGAACACACTCGAGAATGAAGATGAAGCAACACCTCCTTCTCAAATTCTACATGCTTTGGTTGTTTCTCCCTTTGTTCAAGAGAAGTTGTATGTGGGGGAAAAGTGCTTTCTGCCAAAAGAAACTGTCACCACTCTGACAAAACTTGAAGATATTCAATCAAAACCTACCATGCTTGAGGAACTTAAACAGCAAATTGGAACAGACCTTAAGAAACCAAAACAAGAATAA 801 0.3945 MIPDSETSTFNEAMSEEEVAPNIQHLFPYSDESFFLSNTLLENYIDPNAAFLYPSEIHSPFDPFISLPHEDYNHFPCSKRQKLCFEEQQVLLHSQDLTPPTIDEFGNCYSFQSEETQQQQLFCMDEENGKERTIYPQSVAARERRRKITNKTQELGKLVPGGTKMNTADMLNAVAKYVKFLQAQVGMLELMNTLENEDEATPPSQILHALVVSPFVQEKLYVGEKCFLPKETVTTLTKLEDIQSKPTMLEELKQQIGTDLKKPKQE* 267
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0065 266 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 15 253 - -
Pvu1g0065 266 SMART finulus 138 187 IPR011598 GO:0046983
Pvu1g0065 266 Gene3D - 136 201 IPR036638 GO:0046983
Pvu1g0065 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 192 IPR036638 GO:0046983
Pvu1g0065 266 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 15 253 - -
Pvu1g0065 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 132 181 IPR011598 GO:0046983
Pvu1g0065 266 Pfam Helix-loop-helix DNA-binding domain 142 182 IPR011598 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu1g0065 Pvu-Chr1 526509 527693 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu1g0065 HLH 1.8e-05 No_clan