Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0055 ATGAGGAAGTGGACGGTTGCTTCCGTTCTCCTTCTACTCTCTCTCCTCTTTCTCTTTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCCGCGGGCGATTCCGACGAGCTTGTAGATCCGCCGAAGGTGGAGGACAAGATCGGCGCTGTTCCTCATGGCCTTTCCACCGATTCAGATGTCGTCAAAAGGGAGGCGGAGTCGATCTCGAAGAGATCTCTTCGGAGCTCCGCGGAGAAGTTTGAGTTCCAAGCGGAAGTTTCACGGCTCATGGATATTATCATCAACTCTCTCTACAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGACGCTTTGGACAAGATTAGGTTCCTCTCTCTCACGGACAAGGAGGTTCTGGGAGAAGGTGATAACACCAAGCTTGATATTCGGATTAAGTTAGACAAGGAAAAGAAAATTCTCTCGATCCGAGACCGGGGTATTGGTATGACAAAGGAGGATTTGATTAAGAATTTGGGGACAATTGCTAAATCTGGAACTTCAGCCTTTGTTGAGAAAATGCAAACAAGTGGAGATCTCAATCTGATTGGGCAGTTTGGTGTCGGCTTTTACTCTGTGTATCTCGTGGCTGACTACGTTGAAGTCGTTAGCAAGCATAACGATGATAAGCAGTATGTATGGGAATCAAAAGCTGACGGAGCTTTTGCAATTTCGGAAGATACATGGAACGAACCTCTTGGACGAGGAACCGAAATTAGACTACACCTCAAAGAAGAGGCTGGGGAGTACTTGGAGGAATCTAAACTGAAAGAATTGGTGAAGAGGTACTCTGAATTTATTAACTTCCCTATCTATATCTGGGCAAGCAAAGAGGTTGATGTGGAGGTTCCCGCAGATGAAGATGAATCCGGCGATGAAGATGATTCTGCTTATGGCAGCTCCAAAGAGGAAACCGAAGACGAAGATGCGGATAAAGGTGAAGATGACGAAGACAAAAAGCCTAAGACAAAGACAGTGAAGGAAACAACTTACGAATGGGAACTTCTAAATGATGTGAAAGCTATATGGCTGAGGAATCCAAAGGAGGTTACAGAGGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAATGATGAGAAACCTCTATCGTGGAGTCACTTCACTGCCGAAGGTGATGTAGAGTTCAAGGCAGTCCTGTTTGTACCACCCAAGGCACCTCAAGATTTATACGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGAGTGTTCATTTCAGACGAGTTTGATGAACTGTTGCCCAAGTACCTAAACTTCTTGAGGGGTCTTGTTGATTCTGACACATTACCACTTAATGTATCGCGAGAGATGCTTCAACAACATAATAGTCTAAAGACAATCAAGAAGAAACTTATCAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCCGACGAGTCCACAGACAAAGAAAAGAAAGAAAATGCATCCTCTGACAAGGATGAGAAGAAAGGTCAATATGTCAAGTTCTGGAACGAGTTCGGTAAATCCATTAAACTTGGTATCATCGAGGATGCCACTAACAGAAATCGGTTGGCAAAATTGCTCAGATTTGAGAGCACCACGTCTGACGGTAAATTGACATCCCTGGATCAGTACATATCTAGAATGAAAGCTGGGCAGAAGGACATCTTTTACATAACTGGAACCAACAAAGAACAACTGGAAAAATCTCCATTCCTTGAGCGGCTTAAGAAGAAAAATTTTGAGGTTATTTTCTTCACGGATCCAGTTGATGAATACTTGATGCAATACCTGATGGATTATGAAGATAAAAAGTTCCAAAATGTGTCCAAGGAGGGTTTGAAACTTGGGAAGGATACTAAAAACAAGGAACTGAAGGAATCCTTTAAGGATCTTACCAAGTGGTGGAAAAGTTCTCTTTCCAAGGACAATGTCGATGATGTGAAGATATCCAACCGATTGGATAACACTCCTTGTGTAGTGGTGACATCAAAATATGGTTGGAGTGCAAACATGGAGCGAATCATGCAGTCTCAAACTTTGTCAGATGCTAGCAAGCAAGCATACATGCGTGGCAAGAGGGTGCTTGAGATCAATCCTAGGCACCCTATTATCAAGGAGCTCCGCGAGAGAGTAGTAAAGAACCCCGAGGATGAGGGTGTAAAACAAACAGCACAGCTGATGTACCAGACTGCACTCTTCGAAAGTGGCTTCCTGCTTGATGATCCCAAGGATTTTACTTCCCGTATTTATGATTCAGTGAAGACTAGCTTGGACATCAGTCCTGAAGCAACAGTTGAAGAGGAAGATGACACCGAAGCGGAGGCTGAAAGTGAGGCAAAACAAGATACTCCAAAGCCTGATGAAGTTGATGATGATGTCGACGATACCAAAGACGAGTTGTAG 2454 0.436 MRKWTVASVLLLLSLLFLFADQGRKFQANAAGDSDELVDPPKVEDKIGAVPHGLSTDSDVVKREAESISKRSLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLDIRIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVVSKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLEESKLKELVKRYSEFINFPIYIWASKEVDVEVPADEDESGDEDDSAYGSSKEETEDEDADKGEDDEDKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFNDEKPLSWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNANKSNLKLYVRRVFISDEFDELLPKYLNFLRGLVDSDTLPLNVSREMLQQHNSLKTIKKKLIRKALDMIRRIADEDPDESTDKEKKENASSDKDEKKGQYVKFWNEFGKSIKLGIIEDATNRNRLAKLLRFESTTSDGKLTSLDQYISRMKAGQKDIFYITGTNKEQLEKSPFLERLKKKNFEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKNKELKESFKDLTKWWKSSLSKDNVDDVKISNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDEGVKQTAQLMYQTALFESGFLLDDPKDFTSRIYDSVKTSLDISPEATVEEEDDTEAEAESEAKQDTPKPDEVDDDVDDTKDEL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0055 817 Gene3D - 541 628 - -
Pvu1g0055 817 Hamap Chaperone protein HtpG [htpG]. 75 771 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Pvu1g0055 817 Pfam Hsp90 protein 259 799 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Pvu1g0055 817 PANTHER BNAA08G14800D PROTEIN 19 800 - -
Pvu1g0055 817 SMART HKATPase_4 100 257 IPR003594 -
Pvu1g0055 817 SUPERFAMILY Ribosomal protein S5 domain 2-like 349 628 IPR020568 -
Pvu1g0055 817 Gene3D - 348 540 - -
Pvu1g0055 817 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 800 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Pvu1g0055 817 MobiDBLite consensus disorder prediction 773 817 - -
Pvu1g0055 817 Gene3D - 65 299 IPR036890 -
Pvu1g0055 817 Gene3D - 635 781 IPR037196 -
Pvu1g0055 817 SUPERFAMILY HSP90 C-terminal domain 647 769 IPR037196 -
Pvu1g0055 817 MobiDBLite consensus disorder prediction 779 793 - -
Pvu1g0055 817 MobiDBLite consensus disorder prediction 488 509 - -
Pvu1g0055 817 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 256 IPR003594 -
Pvu1g0055 817 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 78 287 IPR036890 -
Pvu1g0055 817 MobiDBLite consensus disorder prediction 293 334 - -
Pvu1g0055 817 PIRSF HSP90_HTPG 54 815 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Pvu1g0055 817 ProSitePatterns Heat shock hsp90 proteins family signature. 98 107 IPR019805 GO:0005524|GO:0006457|GO:0051082
Pvu1g0055 817 CDD HATPase_Hsp90-like 87 277 - -
Pvu1g0055 817 PRINTS 90kDa heat shock protein signature 78 98 IPR020575 -
Pvu1g0055 817 PRINTS 90kDa heat shock protein signature 99 121 IPR020575 -
Pvu1g0055 817 PRINTS 90kDa heat shock protein signature 150 167 IPR020575 -
Pvu1g0055 817 PRINTS 90kDa heat shock protein signature 168 185 IPR020575 -
Pvu1g0055 817 PRINTS 90kDa heat shock protein signature 193 215 IPR020575 -
Pvu1g0055 817 PRINTS 90kDa heat shock protein signature 245 262 IPR020575 -
Pvu1g0055 817 PRINTS 90kDa heat shock protein signature 263 281 IPR020575 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0055 Pvu-Chr1 462621 467321 Dispersed