Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0053 ATGGATCGCATCACACTCTTCTCATTCTTTCTAACATTTTATCTTTCACCATATGGGGTGATTTCAACAACATTCACTCTAGTTAACAAATGTGATTACACGGTGTGGCCGGGGATACTCTCGAACGCCGGTGTTCCTCCTCTTTCAACCACCGGCTTCGTTCTACAAACCGGTGCGTCCACCACAATCGCCGCACCTACGTCCTGGGGAGGTCGTTTCTGGGGCCGAACGCTCTGCTCCGAAGACTCCGCAGGCAAGTTCACCTGCGTCACCGGCGACTGTGGCTCCGGCAAGCTCGAATGCGCCGGAAGCGGCGCCGCTCCACCCGCTACACTGGCGGAATTCACCCTCGACGGTTCCGGAGGCCTTGATTTCTTCGACGTAAGCCTTGTGGACGGCTACAACGTGCCGATGTTGGTGGTGCCGCAAGGAGGCTCCGGCGAGAAGTGCACCGCCACGGGGTGCGTCGGGGACCTCAACGACGCGTGTCCGTCGGAGCTGAAGGTGATGAGCGCGGACGGGAGAGAGGGCGTCGCGTGCAAGAGCGCGTGCGAGGCCTTCAACTCGCCGCAGTACTGCTGCAGCGGCGCGTACGGCTCGCCCGACACGTGCAAGCCCTCATCTTACTCTGAGATTTTCAAGAACGCGTGCCCACGCGCTTATAGCTACGCGTACGACGACAAAACCAGCACCTTCACCTGCGCTTCCGCCGATTACACCATCACCTTTTGCCCTTCCCCCTCCACCAGCCAAAAGGCGTCACAGGAACAACAGGGTGGTTCTTCTGCCACCACGCCACTTCTCAACAACGGCACCATGGTGTACGAAGGTGGTTTCGATCAGAGTGAAATCTCGTGGGCCACGTCCAGCCACGTGTCCCAATCGCGAGCCGTTGCCGGCATAGTCGGTGTCGCTATGGCAATGTGGCGGTTCAGCCAGCTCTTCTAA 948 0.5886 MDRITLFSFFLTFYLSPYGVISTTFTLVNKCDYTVWPGILSNAGVPPLSTTGFVLQTGASTTIAAPTSWGGRFWGRTLCSEDSAGKFTCVTGDCGSGKLECAGSGAAPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVVPQGGSGEKCTATGCVGDLNDACPSELKVMSADGREGVACKSACEAFNSPQYCCSGAYGSPDTCKPSSYSEIFKNACPRAYSYAYDDKTSTFTCASADYTITFCPSPSTSQKASQEQQGGSSATTPLLNNGTMVYEGGFDQSEISWATSSHVSQSRAVAGIVGVAMAMWRFSQLF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0053 315 CDD TLP-PA 24 244 - -
Pvu1g0053 315 SUPERFAMILY Osmotin, thaumatin-like protein 23 246 IPR037176 -
Pvu1g0053 315 MobiDBLite consensus disorder prediction 250 269 - -
Pvu1g0053 315 SMART tha2 25 245 IPR001938 -
Pvu1g0053 315 PIRSF PR5 2 284 IPR001938 -
Pvu1g0053 315 Pfam Thaumatin family 29 245 IPR001938 -
Pvu1g0053 315 Gene3D Thaumatin 23 245 IPR037176 -
Pvu1g0053 315 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Pvu1g0053 315 PRINTS Pathogenesis-related protein signature 72 83 IPR001938 -
Pvu1g0053 315 PRINTS Pathogenesis-related protein signature 124 140 IPR001938 -
Pvu1g0053 315 PRINTS Pathogenesis-related protein signature 235 244 IPR001938 -
Pvu1g0053 315 ProSitePatterns Thaumatin family signature. 85 101 IPR017949 -
Pvu1g0053 315 PANTHER OS03G0233200 PROTEIN 9 271 IPR001938 -
Pvu1g0053 315 ProSiteProfiles Thaumatin family profile. 22 245 IPR001938 -
Pvu1g0053 315 PANTHER BNAA02G17480D PROTEIN 9 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0053 Pvu-Chr1 438937 441350 Dispersed/Tandem