Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0048 ATGTTTCTTCTTATGAAGCTCCCTTCTTCTTCTTCTTCTTTCCCTTCTCCTTCTTCACTCTTCCGTTTCATATTATTATCACTAACAACACTTCTGATTGTGTGTGAAAAAACTAGGGCAGTTGTGAAACTGCCACCAAATGTTTCAGTTCCTGCAGTGTTTGTGTTTGGAGATTCGATCATGGACACTGGCAACAACAACAAGAATTTGGCAACAACAGCAAGGTGCAATTATCCACCATATGGTAAGGATTTTAAGGGAGGGATTCCTACTGGCAGATTTAGCAACGGAAAGGTTCCATCTGACTTTATAGTTGAAGAACTGGGCATAAAAGAGTTTCTTCCAGCATACTTGGACTCAAATCTTGAACCTGGAGAATTGGTGACTGGTGTGTGCTTTGCATCTGGTGGCGCAGGATACGACCCTTTAACAGCACAAACATCGTTGACTATATCTTTATCGGGTCAACTAGATTTGTTCAGAGAATACATAGGGAAGTTAGAAGGGATTGTTGGAGAAGACAAGGCCAAGTTCATCTTAGGAAACAGTCTCTATATTGTGGTATTAGGGAGCAATGACATTTCCAACACATACTTTTTAACCCGTGTTAGACAACTGCAATATGATTTTCCTGCATACGCTGATTTTATGCTCTCCTCAGCTTCTACCTTCTTGAAGGAAATATATGGAAAAGGGGCACGGAGGATTGCAGTGTTCAGTGTACCACCACTAGGGTATTTGCCATCACAGAGAACTATTGCAGGAGGAATACAAAGAGATGTAGTAGTGAAGATAAACGACGCCGTACAGATCTTTAACACCAAATTGTCAAAGAAACTTGACTCTCTTCAACACAATTTTCCAGATAGCAGAATGGTGTACATTGATGTTTATAACCCTCTTCTTGACATCATAGTCAACTACCAAAGATATGGGTATAAAGTGGGAGACAAGGGGTGTTGTGGCACGGGCACAATAGAGGTTGTGTTATTATGCAATCATTTGACTCCATTGTGCCCTAACGATTTGGATTATGTGTTTTGGGACAGTTTTCACCCTACTGAAAGTGTTTATAAAAAGCTCATAGCCCCTATTATTGGAAAGTATATCAACAAATTCTTTTGA 1125 0.4009 MFLLMKLPSSSSSFPSPSSLFRFILLSLTTLLIVCEKTRAVVKLPPNVSVPAVFVFGDSIMDTGNNNKNLATTARCNYPPYGKDFKGGIPTGRFSNGKVPSDFIVEELGIKEFLPAYLDSNLEPGELVTGVCFASGGAGYDPLTAQTSLTISLSGQLDLFREYIGKLEGIVGEDKAKFILGNSLYIVVLGSNDISNTYFLTRVRQLQYDFPAYADFMLSSASTFLKEIYGKGARRIAVFSVPPLGYLPSQRTIAGGIQRDVVVKINDAVQIFNTKLSKKLDSLQHNFPDSRMVYIDVYNPLLDIIVNYQRYGYKVGDKGCCGTGTIEVVLLCNHLTPLCPNDLDYVFWDSFHPTESVYKKLIAPIIGKYINKFF* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0048 374 SUPERFAMILY SGNH hydrolase 52 366 - -
Pvu1g0048 374 Pfam GDSL-like Lipase/Acylhydrolase 53 362 IPR001087 GO:0016788
Pvu1g0048 374 CDD SGNH_plant_lipase_like 51 363 IPR035669 -
Pvu1g0048 374 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 21 370 - -
Pvu1g0048 374 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 53 64 IPR008265 GO:0006629|GO:0016298
Pvu1g0048 374 PANTHER GDSL ESTERASE/LIPASE EXL3 21 370 - -
Pvu1g0048 374 Gene3D SGNH hydrolase 43 371 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0048 Pvu-Chr1 388394 392084 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0187 9 3285293 3289219 Pvu1g0048 1 388394 392084 PCT