Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0037 ATGCTAGATTCCGTCCTTCTGGCGCTGTTCTTGCCCTGCCTTGGCATGAGCGCCGTCTTCATCGTCTACATGTGTCTTCTATGGTACGCCACCACTCACCGCGCCGATCCGCCGCTACCGGCGAAGCCACTCCCCGACGCCGGCCTCTCCCCTGCACAGCTCCAAAACCTCCCCTCGATCACCGGAAAAGACCTTCTCATGGGCTCCGAATGCGCCGTCTGCCTCGACGACATCGCCGCCGACCAACCCGCTCGACTGGTTCCCGGTTGCAACCACGCCTTCCATGTGGAATGCGCCGACACCTGGCTCTCCAAGCACCCTCTCTGCCCTCTCTGCAGAGCCAAACTCGACCCCACGCTGTTCTCTTCCTCGGAAAATCCTTGTTGA 387 0.6124 MLDSVLLALFLPCLGMSAVFIVYMCLLWYATTHRADPPLPAKPLPDAGLSPAQLQNLPSITGKDLLMGSECAVCLDDIAADQPARLVPGCNHAFHVECADTWLSKHPLCPLCRAKLDPTLFSSSENPC* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0037 128 Pfam Ring finger domain 70 113 IPR001841 -
Pvu1g0037 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 119 IPR013083 -
Pvu1g0037 128 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 1 128 - -
Pvu1g0037 128 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 128 - -
Pvu1g0037 128 SMART ring_2 71 112 IPR001841 -
Pvu1g0037 128 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
Pvu1g0037 128 SUPERFAMILY RING/U-box 61 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0037 Pvu-Chr1 325660 326046 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0037 1 325660 326046 Pvu1g0037 1 325660 326046 ECH
Pvu1g0037 1 325660 326046 Pvu9g0199 9 3636672 3637999 PCT