Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0031 ATGGGGTTGGGGTTGTTTAAGGCGTTGTTTTGCTGCAACAAGGCCCGTGAAATAGAAATCATGGAGTCATGGGAGTCCTCTCCGGAGAATAGCTCGAGAGAAGATAGTGGAAAAAGGAAAGCAGTTGCAGGTGGTGGTGAGAAAAAGAGTAGCAAGGCACAGACGGGAGCTATTCTGGGAAAACCTTACGTGAAGATAGAGCAAATTTACGAGATGAAGAAAGAGCTGGGAAGTGGGCAATGGGGTGTGACTTATCTGTGCGTGGAGAAGACGACGCAGAGAGAGTACGCATGCAAGTCCATTGCGAAGTCGAAGCTTTTGAGTGCGCAGGAGATTGAGGACGTGAGAAGAGAGGTTATGATTCTGCAGCATCTCTCTGGGCAACCCAACATTGTGGAGTTCAGAGGGGCTTACGAGGACAGACAGCAGGTGCACCTGGTGATGGAGCTGTGCAGCGGCGGCGAACTCTTCGACCGCATCATTGCCAAAGGGAACTACTCCGAGCGTGAGGCGGCGGCCGTCACGCGGCAGATCGTGAACGCCGTTCACGTCTGCCATTTCATGGGCGTCATGCATCGAGACCTCAAGCCGGAGAATTTCTTGCTAGCCACCAACACAGACGACGCTCCCGTCAAAACCACCGATTTTGGACTCTCCATTTTCATCGAGGAAGTGAGGAATGGTGCTTTATGTTGTGTGAGTGAGAAGAGAGGACCATCTCATCTCATCCCAAATCCCATATCACATATCCAATATCCCAACCCCAAACCAAAAGCAAAGAATAAATCAAGAGTGGCAACACACAAACCCCGCAGCAACGAAATAACAATCAACTATGATTCACCACCCCCTCATCGTTTTCACCCTCGTCCACGCCCTCCAACAACCCAACAACCTCGTTTTCAACCTCGTTATGCAAGCTCAGACCCTTCACTTTCCATCGCCCCTTCATCATCATTCAGTGATCCCTCACGAATTCTAGAGAAACCATACTTTGACATTAAAGCGCTTTACACGCTGGAGAGGGAGCTGGGGAGGGGTCAATTCGGGATCACTCGTCTCTGTACCGAGAAGACCACTGGAAGGAAATACGCCTGCAAGTCCATTTCAAAGCGGAGGCTAACCAAAAAGAAGCAAATGGACGATGTGAAGAGGGAAATTCTGATCCTGCAGCACCTCTCGGGTCAACCCAACATCGTTGAGTTCAAGGGCGCTTACGAGGATTTGCAGAACGTGCATTTGGTGATGGAGTTGTGTTTGGGTGGCGAGCTTTTCGATCGCATCACTGCAAAGGGTAGCTACTCCGAGAGTGAAGCTGCTTCCATATTCAGACAAGTCGTGAATGTGGTTCATGCATGTCACTTCATGGGGGTCATGCACAGAGACCTTAAGCCAGAAAATTTCTTGCTTGCTAATAAGGATCCTAAGGCACCCTTGAAAGCCACCGATTTTGGATTGTCCGTGTTCATTGAAGAAGATAAAGTGTATAGGGAGCTTGTTGGAAGTGCGTACTACGTGGCCCCAGAGGTGTTACAAAAGAGTTATGGAAAAGAAATAGATGTGTGGAGTGCAGGAATCATTTTATACATCCTTCTAAGTGGAGTGCCTCCTTTTTGGGCTGAAACCGAGAGAGGCATATTTGATACAATTTTGGAAGGCAAACTTGATCTGGAGAGCGCACCATGGCCTTCTATATCAGCTGCTGCAAAGGATTTGATAAGGAAAATGTTGACCCGTGACCCTAAGAAACGCATTACAGCTGCTGAAGCACTTGAACACCCTTGGATGAAGGAGGGTGGTGAAGCATCTGACAAGCCTATTGACAATGCTGTTTTGAGTAGAATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTTATAGCAGAAAACCTTTCAGAGGAGGAAATCAAGGGCTTGAAACAAATGTTCAACAATATGGACACTGATCGCAGTGGCACAATCACATACGAGGAACTCAAATCTGGATTAACCAAATTGGGATCCAAGCTTAGTGAATACGAAATAAAGCAGCTAATGGAAGCTGCTGATGTTGACAAGAATGGAACTATTGACTATCAAGAGTTCATCACTGCCACTATAAACCGGCATAAACTGGAAAAGGAAGAGAATTTGTACAAGGCTTTTCAATACTTTGACAAGGATAACAGTGGATATATAACAAGAGAAGAGCTTAGACAAGCATTGACTGAATATCAGATGGGAGATGAGGCAACTATAGATGAAGTCATCGATGATGTGGATACTGATAACGATGGGAAAATAAATTACCAGGAGTTTGTGGCAATGATGAGAAAGGGGATTCTGGATATTGATGAGAAGGAGAAACCACGATAG 2370 0.4633 MGLGLFKALFCCNKAREIEIMESWESSPENSSREDSGKRKAVAGGGEKKSSKAQTGAILGKPYVKIEQIYEMKKELGSGQWGVTYLCVEKTTQREYACKSIAKSKLLSAQEIEDVRREVMILQHLSGQPNIVEFRGAYEDRQQVHLVMELCSGGELFDRIIAKGNYSEREAAAVTRQIVNAVHVCHFMGVMHRDLKPENFLLATNTDDAPVKTTDFGLSIFIEEVRNGALCCVSEKRGPSHLIPNPISHIQYPNPKPKAKNKSRVATHKPRSNEITINYDSPPPHRFHPRPRPPTTQQPRFQPRYASSDPSLSIAPSSSFSDPSRILEKPYFDIKALYTLERELGRGQFGITRLCTEKTTGRKYACKSISKRRLTKKKQMDDVKREILILQHLSGQPNIVEFKGAYEDLQNVHLVMELCLGGELFDRITAKGSYSESEAASIFRQVVNVVHACHFMGVMHRDLKPENFLLANKDPKAPLKATDFGLSVFIEEDKVYRELVGSAYYVAPEVLQKSYGKEIDVWSAGIILYILLSGVPPFWAETERGIFDTILEGKLDLESAPWPSISAAAKDLIRKMLTRDPKKRITAAEALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAENLSEEEIKGLKQMFNNMDTDRSGTITYEELKSGLTKLGSKLSEYEIKQLMEAADVDKNGTIDYQEFITATINRHKLEKEENLYKAFQYFDKDNSGYITREELRQALTEYQMGDEATIDEVIDDVDTDNDGKINYQEFVAMMRKGILDIDEKEKPR* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0031 789 ProSitePatterns EF-hand calcium-binding domain. 652 664 IPR018247 -
Pvu1g0031 789 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 225 - -
Pvu1g0031 789 PANTHER SERINE/THREONINE-PROTEIN KINASE 300 782 - -
Pvu1g0031 789 Pfam EF-hand domain pair 713 776 IPR002048 GO:0005509
Pvu1g0031 789 Pfam EF-hand domain pair 644 704 IPR002048 GO:0005509
Pvu1g0031 789 MobiDBLite consensus disorder prediction 23 54 - -
Pvu1g0031 789 Gene3D Transferase(Phosphotransferase) domain 1 156 282 - -
Pvu1g0031 789 SMART efh_1 750 778 IPR002048 GO:0005509
Pvu1g0031 789 SMART efh_1 643 671 IPR002048 GO:0005509
Pvu1g0031 789 SMART efh_1 715 743 IPR002048 GO:0005509
Pvu1g0031 789 SMART efh_1 679 707 IPR002048 GO:0005509
Pvu1g0031 789 Pfam Protein kinase domain 338 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0031 789 Pfam Protein kinase domain 70 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0031 789 ProSiteProfiles EF-hand calcium-binding domain profile. 639 674 IPR002048 GO:0005509
Pvu1g0031 789 MobiDBLite consensus disorder prediction 299 322 - -
Pvu1g0031 789 ProSitePatterns EF-hand calcium-binding domain. 759 771 IPR018247 -
Pvu1g0031 789 Gene3D Phosphorylase Kinase; domain 1 340 423 - -
Pvu1g0031 789 Gene3D Phosphorylase Kinase; domain 1 72 155 - -
Pvu1g0031 789 Gene3D - 604 778 - -
Pvu1g0031 789 SUPERFAMILY EF-hand 635 776 IPR011992 -
Pvu1g0031 789 SUPERFAMILY Protein kinase-like (PK-like) 70 226 IPR011009 -
Pvu1g0031 789 ProSiteProfiles Protein kinase domain profile. 338 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0031 789 CDD STKc_CAMK 338 595 - -
Pvu1g0031 789 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 46 225 - -
Pvu1g0031 789 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 300 782 - -
Pvu1g0031 789 ProSiteProfiles EF-hand calcium-binding domain profile. 747 781 IPR002048 GO:0005509
Pvu1g0031 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pvu1g0031 789 SUPERFAMILY Protein kinase-like (PK-like) 338 603 IPR011009 -
Pvu1g0031 789 ProSiteProfiles EF-hand calcium-binding domain profile. 711 746 IPR002048 GO:0005509
Pvu1g0031 789 MobiDBLite consensus disorder prediction 23 46 - -
Pvu1g0031 789 MobiDBLite consensus disorder prediction 243 322 - -
Pvu1g0031 789 ProSiteProfiles EF-hand calcium-binding domain profile. 675 710 IPR002048 GO:0005509
Pvu1g0031 789 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0031 789 SMART serkin_6 338 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0031 789 ProSiteProfiles Protein kinase domain profile. 70 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0031 789 ProSitePatterns EF-hand calcium-binding domain. 688 700 IPR018247 -
Pvu1g0031 789 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Pvu1g0031 789 Gene3D Transferase(Phosphotransferase) domain 1 424 603 - -
Pvu1g0031 789 ProSitePatterns EF-hand calcium-binding domain. 724 736 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0031 Pvu-Chr1 296138 300639 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu1g0031 Pkinase 1.6e-74 CL0016