Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0018 ATGTCGCTCACCGTGGCGGCTCTCCTTTGTCTTTCTCTCTTCGCCGTCGCTGCTGTCGCTGAAGATCCCTACAGGTTCTTCAACTGGAATGTTACATACGGAGACATTTATCCACTTGGTGTTCGCCAACAGGGAATACTTATCAACGGTCAATTCCCAGGTCCAGACATTCATTCTGTTACAAACGACAACCTCATCATCAATGTCTTCAACAGCTTAGACCAACCCTTTCTCCTATCCTGGAACGGGGTGCAGCAGAGAAGGAACTCGTTCGAAGACGGGGTGTGGGGAACAACATGTCCCATTCCACCAGGAGGGAACTTCACATACATACTTCAGGTGAAGGATCAAATTGGAAGCTTCTACTACTTCCCGTCTCTGGCATTCCACAAAGCTGCCGGTGGATTTGGAGGTCTCAGGATTCTGAGCAGACCCAGAATTCCTGTCCCTTTCGACGATCCCGCCGGTGATTACACTGTTCTCATCGGAGATTGGTACAAGTTCAACCACACGGATTTGCAGGCTATTCTTGATAGAGGTAGTAAGTTGCCTTTCCCTGATGGAATCCTCATCAATGGTCGTGGCTCTAACGGAGCATCTTTCAATGTGGAACAAGGAAAGACGTACAGGCTGAGAATATCGAATGTGGGGTTGGAAAATTCCCTGAATTTCCGCATACAAAACCACAAATTGAAGCTGGTAGAAGTGGAAGGAACCCACACGGTTCAAACAACGTACTCATCTCTTGACGTGCATGTGGGTCAGTCTTACTCTGTTCTGGTCACTGCGGATCAACCTGGTCAGGACTATTACATCGTCGTCTCCTCTCGATTTACCTCCACAGTCCTCACCTCCACCGCCATTCTTCGCTACGCCAACTCCGCTGGCCCGGTCTCAGGCCCACCCCCCGGTGGACCCACCATCCAGATTGATTGGTCTCTGAACCAGGCCCGCTCCATCAGGACCAACCTGACAGCAAGTGGACCTAGGCCGAACCCGCAAGGATCCTATCACTACGGTCTGATAAACACCACGAGGACCATCATACTGTCGAGTTCAGCAGGTATAATAAATGGCAAGCAGAGATACGGAATCAACAGTGTGTCTTACGTTGCTCCCGACACTCCTCTTAAGCTCGCCGACTACTTCAAAATCCCTGGTGTTTTCCGTGTTGGAACCATTTCCGACAGGCCCACCGGTGGCGGCATTTACCTTGACACATCCGTTATGCAAACCGACTACAGAACATTTGTGGAGATTGTCTTCCAAAACGACGAAGACGTAATTCAGAGCTACCATCTCGATGGCTACTCTTTCTTTGTGGTTGGTATGGATGGAGGACAGTGGACGGCTGCTAGCAAGAACCAGTACAATCTTCGAGATGCAGTTTCGCGGTGCACCACTCAGGTATATCCCAAGTCATGGACCGCTATCTATATTCCGCTTGACAACGTGGGAATGTGGAACTTGAGATCTGAATTTTGGGCACGCCAATACCTCGGCCAACAGTTTTATATGCGCGTTTACACAACATCAACCTCAATCAGAGATGAATATCCTGTTCCAAAGAATGCTCTGCTTTGTGGCAGAGCAAGTGGCAGACACACTCGACCCCTTTGA 1620 0.4957 MSLTVAALLCLSLFAVAAVAEDPYRFFNWNVTYGDIYPLGVRQQGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGVQQRRNSFEDGVWGTTCPIPPGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGLRILSRPRIPVPFDDPAGDYTVLIGDWYKFNHTDLQAILDRGSKLPFPDGILINGRGSNGASFNVEQGKTYRLRISNVGLENSLNFRIQNHKLKLVEVEGTHTVQTTYSSLDVHVGQSYSVLVTADQPGQDYYIVVSSRFTSTVLTSTAILRYANSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTRTIILSSSAGIINGKQRYGINSVSYVAPDTPLKLADYFKIPGVFRVGTISDRPTGGGIYLDTSVMQTDYRTFVEIVFQNDEDVIQSYHLDGYSFFVVGMDGGQWTAASKNQYNLRDAVSRCTTQVYPKSWTAIYIPLDNVGMWNLRSEFWARQYLGQQFYMRVYTTSTSIRDEYPVPKNALLCGRASGRHTRPL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0018 539 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 6 532 - -
Pvu1g0018 539 Gene3D - 340 535 IPR008972 -
Pvu1g0018 539 SUPERFAMILY Cupredoxins 19 171 IPR008972 -
Pvu1g0018 539 Pfam Multicopper oxidase 157 293 IPR001117 -
Pvu1g0018 539 CDD CuRO_2_AAO_like_1 156 291 IPR034271 -
Pvu1g0018 539 SUPERFAMILY Cupredoxins 151 331 IPR008972 -
Pvu1g0018 539 PANTHER MULTI-COPPER OXIDASE 6 532 IPR045087 -
Pvu1g0018 539 Gene3D - 24 145 IPR008972 -
Pvu1g0018 539 Pfam Multicopper oxidase 376 511 IPR011706 GO:0005507|GO:0016491
Pvu1g0018 539 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Pvu1g0018 539 SUPERFAMILY Cupredoxins 341 530 IPR008972 -
Pvu1g0018 539 CDD CuRO_3_AAO_like_1 373 493 IPR034275 GO:0005507
Pvu1g0018 539 Gene3D - 155 330 IPR008972 -
Pvu1g0018 539 CDD CuRO_1_AAO_like_1 26 141 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0018 Pvu-Chr1 234187 238304 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0018 1 234187 238304 Pvu1g0018 1 234187 238304 ECH
Pvu1g0018 1 234187 238304 Pvu9g0217 9 4170252 4175871 PCT