Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0016 ATGGCGGGTCAGTGCTCCAATGAAGGCTCCAGTACTGGAAATATTTCAGCAGAGTGTTCAGATTCAACTGTTCAGCTCAATATCAAGACTCTGGATTCCCGAATCTACAGTTTTCAAGTGAACAAAAATATGCCTGTTTCGTTGTTCAAAGAGAAAATTGCAAATGAAATTGGTGTTCCAGTTAGTCAGCAACGACTGATATTTAGAGGAAAAGTCTTGAAGGATGAACATGTTCTTTCTGAGTATCATGTTGAGAATGGACATACATTGCATTTAGTTGAAAGACAACCAAATCAGCCGCAGGCTTCTGGTACAAGTGCTGATGAGCCCACTGGTACGAGTAGTAACCGAGGAAATGATGTGGGCTCAGGTCCTCCTCGTAACCGTGTTGGGCAAATTTCACACAGTGTTGTTCTTGGGACATTTAACGTGGGGGAACAGGGCGAAGGAATTGTTCATGACCTCACTCGGGTTATTGGGCATGTTTTAAATTCTATTGGAAACGGTGGCCAGAGTACAGTTAATGGTCCTAATGCTGCGCAAACTTCTTCAGCTCATCCAGGCAATGAAACTGAAGGAATGCATGCTGGAAATCAAAACCCAGCAGGAAACCAGGCGCCATCTGGACAAACATTTCATGGTCCGACATTCCAATCTGTGTCTCATGTTGTTCAGATTCCTGCAGCAGCTGGATCCATAGCCCTCCCATCTCTCAATGCACCAATTCCTGATTCATTGAACACTCTGATTGAGTTTATGAATCAAATGGAACACACACTGACACAAAATGGTTATCAGTCAAATTTTTCACTAGCTAACCCTGGAGATCAGCGAGTGGAATTGCCTTCTAATTCGCAAGGGTTGCCAAATCTAGAAGCATTAAGTATTGTCTTACGTCATGCAGAACGGTTACTTGGTGGTCAAGCTGTTGCTGCACTATCTCATATTGCAGGACGCTTGGAAAGAGAAAGAGCTTCTGCTGATCCTCGTATAAGAGGTCAAATACAGTCAGAGTCAGTGCAAATAGGACTTGCTATGCAGCATTTGGGTGCACTTTTACTTGAACTTGGCCGGACAATGTTGACATTGCGAATGGGACAATCTTCTGCAGAATCGGTTGTTAACGCTGGACCAGCTGTTTACATTTCTTCATCAGGGCCAAATCCTATAATGGCGCAGCCTTTTCCACTTCAGACAAGCTCCCTCTTTGGTGGTCCAGTTCCCTCCTCAACTCCTGCTACTTTGGGTACCATTGGTATTGGAAGTGCTCCTAGGAACGTAAACATTCATATACATGCTGGTACCTCTCTTGCACCAATTGTTTCAGCAATTGGTTCTAGGACAAATAATGGAGAAGGGACAAGAAGTGAACTGCATAATGAGCCTGGTTCTGGTGGTTCAGGTTCATCACGGGTACTACCTGTTAGAAATGTCATAGCCACAGCTATCCCATCACACCCTTCTGGTGTTGGAGTCTGTAGTAGCTCACAAACTGGGTTTGGTGTTTCTACTTCACAGCCACCTGATTCAGCCTCATTGTCATCTGTTTTAGCTGAAATTGATTCTCGCCTTAGGAATGTTGTTGGTAGTATGCAAGGGGATAACACAGTTCGATCAGGGGAAATGGAATCAATCAGCAGGGACTTGTCTTCTGGATCTGAATCAAGACCTTCTGCACTAAATGCACAGCAAGATACAACGGAAATGAATGGTGTTGGGGCTGCCAGTGCTTCCTTAGTTGGCTGTACTTCTGAAAGTGAGGCACAGAAGCTCCAAACTGAGGCAGGCCAAACCTCTAGTAATGATGAGAGAGATGTTTTGGTTGACAAATTTGTTTCTTCTTCAAAACAAGATTTACAAAGTTGTTCTAGTGGAGAAGCAATAGTAAAACCAGAAAATGACATCGATGTTCCAGCTGTTAGTGACAGACAAGATGTAACTGAACCTGCCAAAGCTGCTCCACTAGGATTGGGTGTGGGTGGCTTAGAGCGTAAG 1995 0.4416 MAGQCSNEGSSTGNISAECSDSTVQLNIKTLDSRIYSFQVNKNMPVSLFKEKIANEIGVPVSQQRLIFRGKVLKDEHVLSEYHVENGHTLHLVERQPNQPQASGTSADEPTGTSSNRGNDVGSGPPRNRVGQISHSVVLGTFNVGEQGEGIVHDLTRVIGHVLNSIGNGGQSTVNGPNAAQTSSAHPGNETEGMHAGNQNPAGNQAPSGQTFHGPTFQSVSHVVQIPAAAGSIALPSLNAPIPDSLNTLIEFMNQMEHTLTQNGYQSNFSLANPGDQRVELPSNSQGLPNLEALSIVLRHAERLLGGQAVAALSHIAGRLERERASADPRIRGQIQSESVQIGLAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISSSGPNPIMAQPFPLQTSSLFGGPVPSSTPATLGTIGIGSAPRNVNIHIHAGTSLAPIVSAIGSRTNNGEGTRSELHNEPGSGGSGSSRVLPVRNVIATAIPSHPSGVGVCSSSQTGFGVSTSQPPDSASLSSVLAEIDSRLRNVVGSMQGDNTVRSGEMESISRDLSSGSESRPSALNAQQDTTEMNGVGAASASLVGCTSESEAQKLQTEAGQTSSNDERDVLVDKFVSSSKQDLQSCSSGEAIVKPENDIDVPAVSDRQDVTEPAKAAPLGLGVGGLERK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0016 665 Gene3D - 13 108 - -
Pvu1g0016 665 MobiDBLite consensus disorder prediction 585 602 - -
Pvu1g0016 665 CDD Ubl_ubiquitin_like 26 93 - -
Pvu1g0016 665 MobiDBLite consensus disorder prediction 445 471 - -
Pvu1g0016 665 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Pvu1g0016 665 PRINTS Ubiquitin signature 55 75 IPR019956 -
Pvu1g0016 665 PRINTS Ubiquitin signature 76 97 IPR019956 -
Pvu1g0016 665 MobiDBLite consensus disorder prediction 92 131 - -
Pvu1g0016 665 MobiDBLite consensus disorder prediction 585 604 - -
Pvu1g0016 665 SMART ubq_7 24 95 IPR000626 GO:0005515
Pvu1g0016 665 MobiDBLite consensus disorder prediction 641 665 - -
Pvu1g0016 665 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 665 - -
Pvu1g0016 665 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Pvu1g0016 665 MobiDBLite consensus disorder prediction 532 563 - -
Pvu1g0016 665 MobiDBLite consensus disorder prediction 168 215 - -
Pvu1g0016 665 MobiDBLite consensus disorder prediction 92 122 - -
Pvu1g0016 665 SUPERFAMILY Ubiquitin-like 19 99 IPR029071 -
Pvu1g0016 665 MobiDBLite consensus disorder prediction 490 513 - -
Pvu1g0016 665 PANTHER OS07G0498800 PROTEIN 6 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0016 Pvu-Chr1 209557 215980 Transposed