Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0010 ATGCGCAAGACTCTCATGGAAGGTGTGAGTGGGAGGATTGCGGAGATGATGAGCATGAAAGAAGAAAGCAAAAAAGTGGATGAAAGAGAGGTTATACCGCTGCTCACCCCATACAAGATGGGAAATTTTAATCTCTCCCACAGGATTGTGTTGGCACCGTTATCACGATCCAGGTCTTACAACTTCGTCCCTCAGCCGCATGCTGTTCTCTATTATTCTCAGAGAGCAACTAAGGGTGGCTTCTTAATTGGGGAGGCCTCCGGGGTGTCTATTACAGCTCAGGGGTACCCTAACACACCTGGGATTTGGACAAGAGAACAGGTGGAAGCTTGGAAACCCATTGTGAGCGCTGTTCATGAAAAGGGAGCTATTTTCTTTTGTCAACTTTGGCATGCTGGAAGAGTCTCTAGCTGCGAATACCAACCAGATGGCGAAGCCCCGATATCAAGCACAGATAAGCGACTTCGTAAGGATATTGCCAACAATAAAGCAACAGCTGATAGATACGCAACTCCTCGTCGGGTGAGAACCGATGAAGTCCCCAACCTTGTCAATGACTTCGTAATTGCTGCTAAAAATGCCATCGAAGCAGGTTTTGATGGAGTGGAGATTCACGGAGCGAACGGGTACTTACTGGATCAGTTCCTGAAGGATGAGGTGAACGACAGAGATGACGAATACGGAGGTAGCTTAGAAAATCGTTGCCGCTTCCCACTGCTAGTGGTGAAGGCAGTGGCTGATGAGATTGGAGCTGACAAGGTTGGGATTAGGCTCTCGCCATTCGCTGATTATAACGATTGTGGAGACTCTGAGCCTCAGGCATTGGGGCGATACATGGCTGAATCACTGAATGAAATGGACATTCTGTATATTCACTTGATTGAGCCTAGGATGGTAACACAATTCCAGAAGTTTGACACCAATTGGTCCCTAACACCAATGAGGGAGGCCTTCAAGGGGACTTTTATTGTGGCTGGTGGTTACGATAGGAGTGAGGGAAATCAGGCTATATCTACCGCTGCCGCCGATTTGGTCGCTTATGGACGCCTCTTTCTGGCCAATCCAGATCTCCTCACAAGATTTGAAGTCGATGCTGAGTTGAACCAACCCGATGCCACCACCTTTTACACGCATCATCCTGTTCTTGGATATACCGATTATCCTTTTCTTCATCATATATAA 1182 0.4738 MRKTLMEGVSGRIAEMMSMKEESKKVDEREVIPLLTPYKMGNFNLSHRIVLAPLSRSRSYNFVPQPHAVLYYSQRATKGGFLIGEASGVSITAQGYPNTPGIWTREQVEAWKPIVSAVHEKGAIFFCQLWHAGRVSSCEYQPDGEAPISSTDKRLRKDIANNKATADRYATPRRVRTDEVPNLVNDFVIAAKNAIEAGFDGVEIHGANGYLLDQFLKDEVNDRDDEYGGSLENRCRFPLLVVKAVADEIGADKVGIRLSPFADYNDCGDSEPQALGRYMAESLNEMDILYIHLIEPRMVTQFQKFDTNWSLTPMREAFKGTFIVAGGYDRSEGNQAISTAAADLVAYGRLFLANPDLLTRFEVDAELNQPDATTFYTHHPVLGYTDYPFLHHI* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0010 393 Pfam NADH:flavin oxidoreductase / NADH oxidase family 34 366 IPR001155 GO:0010181|GO:0016491
Pvu1g0010 393 PANTHER NADH OXIDOREDUCTASE-RELATED 30 391 IPR045247 GO:0010181|GO:0016491
Pvu1g0010 393 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 30 391 - -
Pvu1g0010 393 Gene3D Aldolase class I 20 393 IPR013785 -
Pvu1g0010 393 CDD OYE_like_FMN 33 371 - -
Pvu1g0010 393 SUPERFAMILY FMN-linked oxidoreductases 33 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0010 Pvu-Chr1 169087 171622 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0010 1 169087 171622 Pvu1g0010 1 169087 171622 ECH