Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0009 ATGCACTTGAGCGAGAACGAAGGGATAGAGGGGAAGACCTTCGTGGTGACGGGTGGACTCGGATTCGTGGGGTCTGCTCTCTGCTTGGAGATCATTCGAAGAGGTGCAAGAGAGGTGCGAGCCTTTGACCTCCGCTCCTCTTCTCCCTTTTCCCCTGCTCTCCGTGACAAGGGAGTCCGCTTCATCCAAGGTGATGTTGGCCGCAAAGAAGACGTGGAAAGGGCCCTCCGCGGTGCCGATTGTGTTTTCCACCTTGCGGCCTTTGGAATGTCGGGTAAAGAGATGCTCCAGTTTGGTCGTGTTGATGAAGTCAACATAAATGGGACCTGCCATGTTCTCGACGCTTGTATCGACCTCGGCATCACAAGGCTTGTCTACTGTAGCACTTACAATGTTGTCTTCGGTGGTCAACAGATCATCAATGGAAATGAGGCATTACCTTATTTCCCAATTGATCACCATGCCGATCCATATGGCCGTAGTAAATCAATTGCTGAGCAGTTCGTTCTAAAGAACAATGCCCGCGCTCTCAAGAACCACTCGGGAAATCGTCTTTACACTTGTGCTATTCGTCCAGCTGCAATCTATGGACCTGCAGAAGACGGGCACCTTCCAAGGATCGTAACCATGGCAAAGTTGGGTCTCCTTTTGTTCAGAATTGGCGACCAAACTGTAAAATCAGATTGGCTTTTTGTGGACAACCTTGTCCTTGCTCTTATATTGGCCAGCATGGGACTTTTGGATGACAATCGTAGCCAGGCAAAACGCCCTGTAGCTGCTGGCCAGGCCTACTTTATATCTGATGGTTCACCGGTCAATTCTTTTGAATTCCTACAGCCTCTACTTAGGAGTTTGGATTATGAACTACCAAAGACTTCCCTACCGGTGGATCGGGCTCTTGTTCTTGGGAGGATTTGCTGGGCTGTTTATACAATCCTATATCCATGGCTCAATCGGTGGTGGCTTCCACAACCATTCATCCTTCCCTCTGAAGTACACAAGGTGGGCGTCACTCATTATTTCTCTTATCTTAAAGCCAGAGAGGAGATTGGCTATGTTCCCATGGTGACCTCGCGTGAGGGGATGGCTTTGACCATATCTTACTGGCAACAGAGGAAAAGAGCGACTTTGGATGGACCAACGATCTACGCGTGGTTGTTTTGTGTCATTGGAATGATCTCACTCTTTTGCGGTGCTTTCTTACCTGACAAAGGAATCGTGTTTCTTCTCAGAGCTATATGTCTATTTGTCTTTCGATCAATGTGGGTGACAAGGCTGGTGTTTCTTCTGGCTACAACTGCACATATTGCTGAGGCCATTTATGCATGGTACCTGGCTCAAAGGGTGGATCCTGCCAATGCAAGAGGATGGTTTTGGCAAACTTTTGCTCTTGGGATGTTTTCGTTGCGCCTCCTTTTGAAAAGAGCGAGGACATAA 1437 0.4836 MHLSENEGIEGKTFVVTGGLGFVGSALCLEIIRRGAREVRAFDLRSSSPFSPALRDKGVRFIQGDVGRKEDVERALRGADCVFHLAAFGMSGKEMLQFGRVDEVNINGTCHVLDACIDLGITRLVYCSTYNVVFGGQQIINGNEALPYFPIDHHADPYGRSKSIAEQFVLKNNARALKNHSGNRLYTCAIRPAAIYGPAEDGHLPRIVTMAKLGLLLFRIGDQTVKSDWLFVDNLVLALILASMGLLDDNRSQAKRPVAAGQAYFISDGSPVNSFEFLQPLLRSLDYELPKTSLPVDRALVLGRICWAVYTILYPWLNRWWLPQPFILPSEVHKVGVTHYFSYLKAREEIGYVPMVTSREGMALTISYWQQRKRATLDGPTIYAWLFCVIGMISLFCGAFLPDKGIVFLLRAICLFVFRSMWVTRLVFLLATTAHIAEAIYAWYLAQRVDPANARGWFWQTFALGMFSLRLLLKRART* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0009 478 Pfam Transmembrane protein 254 387 473 IPR028110 -
Pvu1g0009 478 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 295 IPR002225 GO:0003854|GO:0006694|GO:0016616
Pvu1g0009 478 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 361 - -
Pvu1g0009 478 Gene3D - 3 375 - -
Pvu1g0009 478 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 42E MEMBER 1 9 361 - -
Pvu1g0009 478 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 372 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0009 Pvu-Chr1 165085 167549 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0009 1 165085 167549 Pvu1g0009 1 165085 167549 ECH
Pvu1g0009 1 165085 167549 Pvu9g0221 9 4468306 4472411 PCT