Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0008 ATGGTCTCTGCAACAAACCCTAACCCTAAATCTAAAAATGTTTACCACATCGGAGGTCTGGAAGTAGAATTTCCTTACCAACCATATGGGTCTCAGTTTGCGTTTATGGGTAGAGTAATCTCTACCCTCAATCAAGCTCAGAGAGAAGGCCACTGTCACGCGTTGCTCGAGTCTCCAACCGGCACCGGCAAGTCCCTTTCGCTTCTTTGTTCATCTCTCGCTTGGCAGCACCACTATAAATCTAAACAAGACCACCTCAAGCCCGCGCCGGAGGCAACCACCGATCCTCTGGCTTATGGCGGCGGATTTGTTCTCGAGGATATTTCACCATCTTCTGAAAACCCGGACCGTACGCAAACTGAGGCCAACAATAAGAAGCAGAAGAAAAAGGAAGCACCGACTATTTATTATGCTTCGAGAACGCACTCACAGATTTCTCAAGTGGTTCACGAATTGCGTAAAACTGCATACAGGGTACCAATGGCTGTGTTGGCGTCGCGGAAACATTACTGCACAAATAAAAATATAATTGGCAAAGAGAATATCAATGAAGAATGTAAACTATTATTGAAAGATCAGGCAACAGGGTGTCCAGAATTCAAAAATGCTCATAAAGTCAAAGGTCATCCATCCCTTCAGAAAGGAGGATGCAATGAAGTGCATGACATAGAAGATATTGTAAAAGTAGGACAATTGGTCAAAGGGTGCTCTTATTATGCTGCTCGTTCTATGTCAGATGATGCACAGCTGGTATTTTGTCCATATAACTACATCATTAATCCAGTCATCCGGGCAGCAATGGATGTGGATATCAAAGGAGCCATAGTGATTCTTGATGAAGCTCACAATATAGAGGACATTGCTCGTGATGCAGGAAGTGTGGATATTGAAGAGGATGTTTTGGATAAACTACAAATGGAACTCCAGCAACTTTGCTCAATCAATGCTGCAATTTACCAACCGCTATATGAAATGACACAGGGCCTTACTAGTTGGATGGAACAGAAGAAACATAAGCTTGAAAAACGTGATTTTCACCACTATGTATCGTGTTGGACTGGTGATAATGCTTTAGGAGAGCTTGAAGAAGCAAATATTTCGAAGCAGTGTTTCCCTATCTTGCTAGAATGTGCTACCAAGGCAATCAAAGTTGCTACAGACTTGGAGACAAATGAACCGCATATAAGTGGCACGGCAGTGATAACATTGGAAGGCTTATTCTCGTCTCTAACTTATTTCTTCTCAAGAAATGGATCTCACATGTTGGATTACCAGCTTGCTCTTCAGCGACGTGTTAGAAAAGATACTGGAAGAGCTACTGGAAACTGGACGTGCGCTTTTAGTTTATGGTGTTTGAATCCAGCGGTTGTGTTTAGAGATGTTGCTGATCTTTCTTTATCAATCATCTTGACTTCAGGAACACTGTCACCAATGGCATCCTTTACTTCTGAGCTTGGAGTTCATTTTGAAACTAGTCTAGAAGCTCCTCATGTAATTGATGTTGACTCACAGGTGTGGCCGGCTGTAATCTCCACTGGTCCTGGCAATTATCCTTTGAATGCAAGTTATAAAACTGCAGATGGATATGCATTCCAGGATGCAGTTGGAAAATCTTTAGAGGAAATCTTCAAGATTGTTCCAGGTGGATGCCTTGTGTTCTTTCCAAGTTATAAATTGATGGACAAATTACGCAACCGTTGGTCTGAAACAGGTCAATGGTCTAGACTAAATGCAGAAAAGCCTCTTTTTGTCGAACCAAGAGGAGGAAGCCAAGATGATTTTGAACTTGCATTAAAGGGGTATTATGATTCAATTCATCATGAAAAAAGACCTGCGCGGGGAAGGAAAAGAAGGATTAAGACAATAGATCTAAATCATGTTCACGCAGTTGATTCCCTACAGAATTCTAGGAAAGGAGGAGCAGCTTTACTTGGTGTTTGCCGAGGAAAGGTTTCTGAAGGAATTGATTTCTCCGATGATAAAGCTAGAGTAGTTATCATTGTTGGTATTCCATTTCCAAATATAAATGATATTCAAGTTGCACTGAAGAAGAAATATAATGACACCTACAAATCAGTCAAAAATCTATTGAGTGGAAATGAATGGTACTGCCACCAAGCATTCCGAGCTTTAAATCAAGCATCTGGGCGCTGTATACGTCATAAATTTGATTATGGAGCAATTATCCTATTGGATGAACGTTTTCAAGAAGAAAGAAATAGGGCATTCATTTCAAAGTGGCTAAGAAGACCGTTGAAAGTATATGACAGCTTTGATTTGTCATTGAAGGGATTAAAATCTTTCTTTGAGAATGTGAAGGAACATTATGGCATAAATACAGTGCATGCCACACAGAGTTTGGATATAAATGGGGATGATGTCCATAAGAAGGATCAGAATGCAGGTTCTACAAGAAAAAAAAATCAGAAGCTGAAAAGGTCTGATAATGGAGGCGGGAAAGAAACAACAATGATCAAGAATAGCATTTCTTCTACGGCCCTAACCTCTCAAGATCTTGTCAAGTGTCAGCCATCAGCTCAAAACAATAGTGACACTTACAGTTGTAAATATCTCCCACAGTACTTTACTAAGACAGACCCAAGGTTCACTATCGAATCATCTGCTGCAATAATGCACGAGGAAACTTCCATTGTCAAGGAAACCCCTTGTATAGATGTTGACTATGATCCCGGTAGCCCTCATTACTCCAAGGATGACAACTCTGGTTCCTTCATAATTGAGGCCCCAGCTCAAATTCCAGATCACTTGTCAAGTCTTTCAATGTCTTCAACTAATGGAAGCAACAATTCTTCAAGGGCCCAGTCTTCAATTACAATTACTCCTAAAAAGAATGTAATTACAAATGATATTCCAGAAATGGAAAGTGTTAATTCTTACCATCATAAAAGGATGAGGGCCACACCGTATATAAACCTTGTTGAAGAAGAAAACTTTATTGCACCTTGTGCCAGTCCTCCTCTTACGCGGTACAGAAAGAGCGCTGTAGTTGTTAGAGAGATAACTCATGGAAGTGAATATGATTTGGAGAGGAATTTGAAGTCAAATTCTCCACCATTACTGACAAACAATATACCCGGTTCATGTTCACCAATTGCCCCTCCACTAGACCAAAGATTATTGATACTTTGTTCACTCTGCAAAAGTCCATTGGGCCGACCTGAGAACCGCCTATATCTTACGTGCTCGTTGATTTCATCATCAAAAGTTCATTTAAGATCCCTTTTGAAACAGCGGCTGAAAACTTGCACTACTGATACTTCAAAGAGTATCCCAGTTATCATGACTGATTCTGCATTTGTTGATCAACGAATTTGCAATAGAATACCCAAAAGCGCACCGGAACACAGTATTTGGTGTCCAGAAGATGGGTGTGTTTTCAGCACTATTTTCTGTCCCTTTTGCAGTAATGTCAGCAATTTGCTCGGAGTTCAAATCATGGCTACCGACTCATCAAATGTTCAGTTACTTGACAAGATATTGTTTTACTTTGATTCATTGGAAGTGAAGAGCAGTGAGGAATCAGGGAACATTGCTTCAGGAAAAGGGGATCTGTCGCCAGTTAATGACTCTGACGAGGATAAAATTACCGTGTTAAATTTGATTGAAAAATATTCTTATCTTCCCCGGCCAGGGAATGCAGAAGTCTGGAAGACTAGAAAATCAAAGGATTAA 3693 0.4054 MVSATNPNPKSKNVYHIGGLEVEFPYQPYGSQFAFMGRVISTLNQAQREGHCHALLESPTGTGKSLSLLCSSLAWQHHYKSKQDHLKPAPEATTDPLAYGGGFVLEDISPSSENPDRTQTEANNKKQKKKEAPTIYYASRTHSQISQVVHELRKTAYRVPMAVLASRKHYCTNKNIIGKENINEECKLLLKDQATGCPEFKNAHKVKGHPSLQKGGCNEVHDIEDIVKVGQLVKGCSYYAARSMSDDAQLVFCPYNYIINPVIRAAMDVDIKGAIVILDEAHNIEDIARDAGSVDIEEDVLDKLQMELQQLCSINAAIYQPLYEMTQGLTSWMEQKKHKLEKRDFHHYVSCWTGDNALGELEEANISKQCFPILLECATKAIKVATDLETNEPHISGTAVITLEGLFSSLTYFFSRNGSHMLDYQLALQRRVRKDTGRATGNWTCAFSLWCLNPAVVFRDVADLSLSIILTSGTLSPMASFTSELGVHFETSLEAPHVIDVDSQVWPAVISTGPGNYPLNASYKTADGYAFQDAVGKSLEEIFKIVPGGCLVFFPSYKLMDKLRNRWSETGQWSRLNAEKPLFVEPRGGSQDDFELALKGYYDSIHHEKRPARGRKRRIKTIDLNHVHAVDSLQNSRKGGAALLGVCRGKVSEGIDFSDDKARVVIIVGIPFPNINDIQVALKKKYNDTYKSVKNLLSGNEWYCHQAFRALNQASGRCIRHKFDYGAIILLDERFQEERNRAFISKWLRRPLKVYDSFDLSLKGLKSFFENVKEHYGINTVHATQSLDINGDDVHKKDQNAGSTRKKNQKLKRSDNGGGKETTMIKNSISSTALTSQDLVKCQPSAQNNSDTYSCKYLPQYFTKTDPRFTIESSAAIMHEETSIVKETPCIDVDYDPGSPHYSKDDNSGSFIIEAPAQIPDHLSSLSMSSTNGSNNSSRAQSSITITPKKNVITNDIPEMESVNSYHHKRMRATPYINLVEEENFIAPCASPPLTRYRKSAVVVREITHGSEYDLERNLKSNSPPLLTNNIPGSCSPIAPPLDQRLLILCSLCKSPLGRPENRLYLTCSLISSSKVHLRSLLKQRLKTCTTDTSKSIPVIMTDSAFVDQRICNRIPKSAPEHSIWCPEDGCVFSTIFCPFCSNVSNLLGVQIMATDSSNVQLLDKILFYFDSLEVKSSEESGNIASGKGDLSPVNDSDEDKITVLNLIEKYSYLPRPGNAEVWKTRKSKD* 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0008 1230 CDD SF2_C_XPD 503 735 - -
Pvu1g0008 1230 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 18 340 IPR014013 GO:0005524
Pvu1g0008 1230 PANTHER FANCONI ANEMIA GROUP J PROTEIN 7 1114 - -
Pvu1g0008 1230 Pfam DEAD_2 137 300 IPR010614 GO:0003677|GO:0003678|GO:0005524
Pvu1g0008 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 731 IPR027417 -
Pvu1g0008 1230 MobiDBLite consensus disorder prediction 108 132 - -
Pvu1g0008 1230 Pfam Helicase C-terminal domain 539 749 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Pvu1g0008 1230 SMART Cxpdneu3 557 737 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Pvu1g0008 1230 MobiDBLite consensus disorder prediction 790 823 - -
Pvu1g0008 1230 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 7 1114 IPR045028 -
Pvu1g0008 1230 MobiDBLite consensus disorder prediction 790 819 - -
Pvu1g0008 1230 Gene3D - 28 341 IPR027417 -
Pvu1g0008 1230 SMART deadxpd 20 339 IPR006554 GO:0003678|GO:0016818
Pvu1g0008 1230 Gene3D - 516 760 IPR027417 -
Pvu1g0008 1230 MobiDBLite consensus disorder prediction 923 943 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0008 Pvu-Chr1 149887 162657 Dispersed