Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0007 ATGGAGAAAGCAGGAGGAGTACTGTCGGCGAAAGAGGCATTCGAGAAGCTTGAAAAGGTTGGAGAAGGAACGTACGGAAAGGTGTACAGGGCAAGAGAAAAGGCCACTGGGAACATCGTTGCCCTCAAGAAGACTCGCCTCCATGAGGACGAAGAAGGTGTTCCTCCCACCACCCTCCGCGAGGTTTCCATTCTGCGGATGCTCTCGCGCGATCCCCATGTTGTCAGGTTAATGGATGTCAAACAAGGTCTGAACAAGGAAGGCAAGACAGTGCTCTACTTGGTATTTGAGTACATGGATACCGATCTCAAGAAATTCATTCGCTCTTTCCGTCAAACTGGAGAATCAATTCCACCTCCAACCATCAAAAGCTTGATGTACCAACTTTGCAAGGGCGTTGCTTACTGCCACGGCCATGGGATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACCGGAAAACAATGATGCTTAAAATAGCTGATCTTGGACTCGCTCGAGCATTCACTGTACCAATTAAGAAATATACGCATGAGATACTTACCCTGTGGTATAGAGCCCCTGAAGTTCTTTTGGGAGCCACCCATTACTCAATGGCTGTGGATATCTGGTCTGTTGCCTGCATTTTTGCCGAACTTGTCACCAAGCAAGCACTCTTTCCTGGTGATTCCGAGCTTCAACAACTCCTTCATATATTCAGGCTGTTGGGCACTCCTAATGAAGAAGTGTGGCCAGACGTGAGTAAACTAATGAACTGGCATGAATACCCCCAATGGAATCCTCAAAGTCTGTCAACGGCTGTTCCGAGTTTGGATGAGCTTGGAATCGATCTGCTATCTCAAATGTTGAAGTATGAACCTTCCAAGAGGATTTCTGCGAAGAAAGCAATGGAACACCCCTACTTTGATGACCTGGACAAGAGGCACCTTTAG 939 0.475 MEKAGGVLSAKEAFEKLEKVGEGTYGKVYRAREKATGNIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGLNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGESIPPPTIKSLMYQLCKGVAYCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVACIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPDVSKLMNWHEYPQWNPQSLSTAVPSLDELGIDLLSQMLKYEPSKRISAKKAMEHPYFDDLDKRHL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0007 312 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Pvu1g0007 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pvu1g0007 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0007 312 PANTHER - 8 310 - -
Pvu1g0007 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Pvu1g0007 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Pvu1g0007 312 SMART serkin_6 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0007 312 PANTHER CELL DIVISION PROTEIN KINASE 8 310 - -
Pvu1g0007 312 SUPERFAMILY Protein kinase-like (PK-like) 12 307 IPR011009 -
Pvu1g0007 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0007 Pvu-Chr1 144309 146169 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pvu1g0007 Pkinase 2.6e-71 CL0016