Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2247 ATGTCGCTCAATATGAAAACCCTAACCCAAGCATTCGCCAAAACCGCTGCGGTCATAGAGAAGACGGTGCAGACCACGGTGCAGGAGGTCACGGGCCCCAAGCCACTTCAGGACTACGAGCTTCTCGATCAGATCGGCTCTGCCGGGCCCGGGCTCGCATGGAGGCTCTACTCGGCCCGGGCCCGTGATCCGGCCCGCCAGCACCAGTACCCCGTCGTCTGCGTCTGGGTTTTGGACAAGCGCGCGCTCTCCGAGGCCCGCATGCGCGCGGGCCTCACCAAGGCCGCCGAGGATTCCTTTCTGGATTTGATTCGGACCGATGCCGCCAAGCTCGTTCGCCTCCGGCATCCCGGCGTCGTTCACGTCGTCCAGGCCCTTGACGAGAGCAAACACGCAATGGCTATGGTCACCGAACCCTTGTTCGCTTCCGCTGCCAACACTCTTGCCATTGTTGACAACATTCCTGTTCTTCCTAAAGATCTCAGGGGAATGGAAATGGGACTGTTGGAGGTGAAGCATGGTTTACTTCAGATTGCAGAATCCCTGGATTTTCTCCACAACCACGCTCATCTTATTCATCGAGCTATATCACCCGAGAACATTCTTATCACCTTGAGTGGAGCCTGGAAACTTGCTGGATTTGGTTTTGCAGTTCCTGCTACTCAGATCTCTGGTGACTCATCTAATCTGCAACCCTTCCATTATGCTGAATATGATGTCGAGGACTCTATTTTGCCTCTTCAGCCATCACTTAATTACACTGCTCCTGAGTTGGTGAGGAGCACTGGGTCTTCAGCTGGGTGCTCATCTGATATTTTCAGTTTTGCATGCCTTGCCTACCATTTAATTGCCCGCAAGTCTTTGTTTGACTGCCACAACAATGTCAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATGCATTCTCATCTATCCCATCAGAACTGGTTCATGACCTGCAAAGGATGCTTTCTCTGAATGAGTCTTCCAGGCCAACAGCAATGGATTTTACAGGATCACCATTTTTTCGGCATGACACTAGGTTGCGTGCCCTACGCTTCCTTGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTTTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTGGTGATACAGCCAATGATTCTACCAATGGTTTTAACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATATACGCTTCCAGCCCTTGTCCCTGTGTTGAGCACTGCTGCTGGTGAGACACTGTTACTACTTGTGAAGCATGCCGATCTTATAATAAACAAGACTAGTCAAGAGCATTTAGTTTCTCACGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCTCGTTTGCAAGAAGAGGTCCTGAAAAAATCTGTATCCCTTTCCAAACAGCTAGATGCCCAGCTTGTCAAACAAGTGGTTTTGCCCCGTGTTCATGGATTAGCACTTAAAACAACAGTTGCGGCGGTTAGAGTCAACGCATTGTTGTGCCTAGGAGACATGGTTAACCGACTTGATAAACATTCTGTCTTGGACATCTTGCAAACAATTCAACGTTGTACTGCTGTTGACCGTTCCCCTCCAACCCTTATGTGTACCCTGGGGGTTGCAAATTCTATTTTCAAGCAGTACGGAGTAGAATTTGTAGCTGAGCATGTTCTTCCATTGCTTATGCCCCTCCTGTCTGCTCAACAATTGAATGTCCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCACAAAATAGAAGAGAAGCGAGGAGTGGCTGTGACTGATTCTGGAATGCCAGAGGTAAAACGGGCTCCTGTGGTTAATGGTCTTCAATCCGAAGCCCTTCGAACAAGCAGCAGTTCTGCTGTGCCTTCTTCAACTAAAAGCAGCGCCTCTTGGGATGAAGATTGGGGTCCCAAAACAAAGAGCACTGCTTCTTCTACCGAGAATTCTATTGATGCAGCCAGTCCATCTATGGCAGGAATCCCTGCGGGTCAAGTAACATCTTTACAAAAGCATTTGTCTTTAGCTGCTTTGTCTGCTCAGCAAACAACCAACTCGTGCCCCTCAGTAGATGTAGAATGGCCACCTCGGGCATCTCCTAGTGTTACCCCACAATTTAGTGATACTGAGAAGCAGACAACAGGAGCAGGAACTTCATCCACATTTAATCTTGAACCTGATGATCCTTTTGCTGATTGGCCTCCACGTCCTAATGGCTCAGTATCAGGTGGATCTGGAATACCGATCAATGGTACTTCAGGAATGCCACTAAACATTGGGCTTAATTCAATGACAAATACTTCAAGCAATATTGGTCCCCAAACTAGCTTGAGTTGGTCTGTTAGTTCCCAAAGTTCTACAGATTCCATTAGTTTGAACTCAAGGACTAGTTCCACTGTGGGTAGCCTGAATAGTGGCCTTGGGCCTCAGAACTCTCTTGGCTTCCTAAAACAAAGTCAAGCTTTGCCAGCATCGAATGTTTCATACAATAATGTTCAGTCAAAAGCAACAGATATAGGTTCAATATTTTCTTCCAACAAGAATGAACACATTGCACCTAAACTTGCACCACCCCCATCATCTGCAGTGGGTAGAGGACGAGGAAGAGGGAGGGGAGCTGTGTCAAACACTAGGTCCTCTCACACCAAGTCACAAACTGAGCAGCCACCCCTTTTGGATTTATTAGGGTAA 2787 0.4726 MSLNMKTLTQAFAKTAAVIEKTVQTTVQEVTGPKPLQDYELLDQIGSAGPGLAWRLYSARARDPARQHQYPVVCVWVLDKRALSEARMRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQALDESKHAMAMVTEPLFASAANTLAIVDNIPVLPKDLRGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENILITLSGAWKLAGFGFAVPATQISGDSSNLQPFHYAEYDVEDSILPLQPSLNYTAPELVRSTGSSAGCSSDIFSFACLAYHLIARKSLFDCHNNVKMYMNTLTYLSSDAFSSIPSELVHDLQRMLSLNESSRPTAMDFTGSPFFRHDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQYTLPALVPVLSTAAGETLLLLVKHADLIINKTSQEHLVSHVLPMIVRAYDDNDARLQEEVLKKSVSLSKQLDAQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHSVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLSAQQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTDSGMPEVKRAPVVNGLQSEALRTSSSSAVPSSTKSSASWDEDWGPKTKSTASSTENSIDAASPSMAGIPAGQVTSLQKHLSLAALSAQQTTNSCPSVDVEWPPRASPSVTPQFSDTEKQTTGAGTSSTFNLEPDDPFADWPPRPNGSVSGGSGIPINGTSGMPLNIGLNSMTNTSSNIGPQTSLSWSVSSQSSTDSISLNSRTSSTVGSLNSGLGPQNSLGFLKQSQALPASNVSYNNVQSKATDIGSIFSSNKNEHIAPKLAPPPSSAVGRGRGRGRGAVSNTRSSHTKSQTEQPPLLDLLG* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2247 928 MobiDBLite consensus disorder prediction 644 690 - -
Pvu11g2247 928 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2247 928 SUPERFAMILY Protein kinase-like (PK-like) 34 347 IPR011009 -
Pvu11g2247 928 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2247 928 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 927 - -
Pvu11g2247 928 MobiDBLite consensus disorder prediction 881 928 - -
Pvu11g2247 928 Pfam Protein kinase domain 104 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g2247 928 Gene3D Transferase(Phosphotransferase) domain 1 161 347 - -
Pvu11g2247 928 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 927 - -
Pvu11g2247 928 MobiDBLite consensus disorder prediction 806 837 - -
Pvu11g2247 928 MobiDBLite consensus disorder prediction 718 784 - -
Pvu11g2247 928 SUPERFAMILY ARM repeat 347 608 IPR016024 -
Pvu11g2247 928 MobiDBLite consensus disorder prediction 905 921 - -
Pvu11g2247 928 MobiDBLite consensus disorder prediction 644 686 - -
Pvu11g2247 928 CDD PK_SCY1_like 45 346 - -
Pvu11g2247 928 MobiDBLite consensus disorder prediction 732 757 - -
Pvu11g2247 928 Gene3D - 348 621 IPR011989 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Pvu11g2247 Pkinase 5e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2247 11 50176173 50185138 Pvu11g2247 11 50176173 50185138 ECH