Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2244 ATGGCGGCGATCGAGGACTTGTCGGAGCTCGCCGATTCGATGCGCCAAGCGGCGGCGCTGCTCGCCGACGAAGACGTCGATGAATCCAACTCCTCCTCCAACAATTCTCGAAGACCGTCTACTTTTCTTAACGTCGTTGCACTCGGCAATGTTGGTGCTGGTAAATCAGCTACTCTCAACAGTTTGATCGGACATCCCGTTCTGCCTACTGGTGAGAATGGAGCTACACGGGCTCCTATATGGATTGATCTGCAGCGAGACACTTCGTTGAGCAGCAAATCCATTATATTGCAGATTGACAACAAGTCTCAGCAAGTCTCCGCAAGTGCTTTGAGACACTCGTTGCAGGATAGACTCAGTAAAGGTTCCTCCGGCAAGAGTCGAGATCAGATTTATTTGAAGCTGCGCACGAGTACAGCACCACCTCTCAAATTGCTCGATTTACCTGGGCTGGATCAGCGCATCATGGATGAGTCAATGGTTAGTGAATATGCAGAGCATAATGATGCCATTTTGCTAGTTATTGTACCTGCAGCTCAAGCACCCGAAATTGCTTCATCTCGAGCCCTTAGATATGCAAAGGAATATGATGGAGAAGGTACCCGAACCATAGGTGTAATTAGTAAAATAGATCAAGCTGCTTCAGACCAAAAAGCACTGGCTGCTGTACAAGCTCTCTTATTGAATCAGGGTCCTCCAAAAACCGCTGATATACCTTGGGTTGCATTGATTGGTCAATCAGTTTCAATAGCTACGGCACAATCTGGATCTGCTGGTTCTGAAAATTCTTTAGAAACTGCATGGAGAGCAGAAAGTGAAACCCTCAAGTCCATATTGACAGGAGCTCCTCAAAGTAAGCTTGGAAGGATAGCTTTAGTGGAGGCCCTGGGGCAGCAAATTCAGAATCGTATGAAGCTTCGGCTTCCTAACCTTCTTTCTGGGTTACAAGGGAAGTCTCAGATAGTTCAGGATGAATTGGCTAGGCTTGGTGAGTCAATGGTTACCACTTCAGAGGGTACACGTGCTATAGCCTTGGAACTTTGCCGTGAATTTGAGGATAAGTTCCTACAGCACATCACCAGTGGCGAGGGATCTGGTTGGAAAATTGTTTCTTGTTTTGAGGGGAGATTTCCTGATAGAATGAAGCAATTACCTTTAGATAGGCATTTTGATATCAACAATGTGAAGAGGATTGTGTTAGAAGCAGATGGTTATCAGCCTTATCTTATTTCCCCTGAAAAGGGATTGAGATCTCTGATCAAAGGTGTTCTAGAGCTTGCGAAAGAACCATCGCGTCTTTGCGTTGATGAGGTACATCGAGTCCTGATGGATATTGTTTCATCTGCTGCCAATGCTACACCAGGTTTAGGAAGATACCTACCTTTCAAGAGAGAGGTTGTCGCAATTGCAACGTCTGCTCTAGAAGGGTTTAAGAATGAGTCAAAGAAAATGGTGGTTGCACTAGTTGATATGGAACGTGCTTTTGTTCCACCTCAACACTTCATTCGCTTGGTACAAAGGAGGATGGAAAGGCAACGTCGAGAGGAGGAGCTGAAGGGAGGCCGACCCTCAAAAAAAGGACAAGATGCTGAGCAATCTCTACTTAACCGGGCCAGTAGTCCCCAAACTGGTGGAAGCATGAAGTCAATGAAGGAGGACAAGAAAGAGAAGGAAAAGGACAAATCTGGTCAGTCAGAGAAAGAAGGGCAAGAAGGCTCGGGTTTGAAGACTGCGGGTCCTGAAGGAGAAATAACAGCAGGATTTTTGTTGAAGAAAAGTGCTAAAACTAATGGTTGGAGCAGGCGATGGTTTGTGCTAAATGAGAAGACAGGAAAGCTTGGGTATACAAAAAAGCAAGAGGAAAGACATTTTCGTGGTGTTATTACATTGGAGGAATGTAACATTGAAGAGGCTGGGGATGAAGATGATCCTCCATCCAAAAGCTCAAAGGACAAGAAGTCCAATGGACCAGATTCTGCCAAAGTCAGCCTTGTATTTAAAATTAGCAGTAGAGTTCCTTATAAATCTGTTCTGAAAGCATACAGTACTGTTGCTTTGAAGGCTGAAAGCGCATCTGATAAGGTTGAATGGATTAAGAAGATAAGTAATGTTATACAAGCAAAGGGGGGACAGATTAGGATCTCATCTGATGGTGGATCTACCATGAGGCAAAGCCTCTCTGATGGTTCCTTGGATACAATGGCTCGAAGACCTGCAGATCCCGAGGAAGAACTCCGATGGATGTCACAAGAAGTTCGTGGATATGTTGAAGCAGTATTAAATAGTTTAGCTGCTAATGTACCAAAAGCAGTTGTTCTTTGTCAAGTTGAAAAAGCTAAGGAAGACATGCTGAATCAATTATATAGCTCTGTCAGTGCTCAAAGCACTGCTAAGATTGAGGAGCTGCTTTTGGAAGATCAAAATGTTAAGCGCAGAAGAGAGAGAATCCAGAAACAATCCTCACTTCTTTCAAAATTGACACGCCAACTGAGTATTCATGACAATCGAGCAGCTGCTGCCTCTGGCTGGTCAAATGGCAATGCAGAGAGTAGCCCAAAAAGCGGTGGACCAGGTGATGACTGGAGATCGGCCTTCGATGCAGCCGCAGATGGCCCTGTTAGTAGAAGTGGTTCTTCAAGATCGGCATCCAACGGTCACAGTCGACATTACAGTGATCCTGCACAAAATGGTGATGCGAACTCCAGTTCAAACTCTGGCAGCCGTCGAACGCCTAATCGGTTACCTCCAGCTCCTCCGGGTTCTTCAGGTTACAAATATTAA 2781 0.4527 MAAIEDLSELADSMRQAAALLADEDVDESNSSSNNSRRPSTFLNVVALGNVGAGKSATLNSLIGHPVLPTGENGATRAPIWIDLQRDTSLSSKSIILQIDNKSQQVSASALRHSLQDRLSKGSSGKSRDQIYLKLRTSTAPPLKLLDLPGLDQRIMDESMVSEYAEHNDAILLVIVPAAQAPEIASSRALRYAKEYDGEGTRTIGVISKIDQAASDQKALAAVQALLLNQGPPKTADIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESETLKSILTGAPQSKLGRIALVEALGQQIQNRMKLRLPNLLSGLQGKSQIVQDELARLGESMVTTSEGTRAIALELCREFEDKFLQHITSGEGSGWKIVSCFEGRFPDRMKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVDEVHRVLMDIVSSAANATPGLGRYLPFKREVVAIATSALEGFKNESKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREEELKGGRPSKKGQDAEQSLLNRASSPQTGGSMKSMKEDKKEKEKDKSGQSEKEGQEGSGLKTAGPEGEITAGFLLKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERHFRGVITLEECNIEEAGDEDDPPSKSSKDKKSNGPDSAKVSLVFKISSRVPYKSVLKAYSTVALKAESASDKVEWIKKISNVIQAKGGQIRISSDGGSTMRQSLSDGSLDTMARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSVSAQSTAKIEELLLEDQNVKRRRERIQKQSSLLSKLTRQLSIHDNRAAAASGWSNGNAESSPKSGGPGDDWRSAFDAAADGPVSRSGSSRSASNGHSRHYSDPAQNGDANSSSNSGSRRTPNRLPPAPPGSSGYKY* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2244 926 CDD DLP_1 45 309 IPR001401 GO:0003924|GO:0005525
Pvu11g2244 926 MobiDBLite consensus disorder prediction 548 567 - -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 874 911 - -
Pvu11g2244 926 Pfam Dynamin family 45 209 IPR045063 -
Pvu11g2244 926 SMART PH_update 583 708 IPR001849 -
Pvu11g2244 926 Gene3D - 582 700 IPR011993 -
Pvu11g2244 926 Gene3D - 41 324 IPR027417 -
Pvu11g2244 926 Coils Coil 799 819 - -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 837 926 - -
Pvu11g2244 926 Pfam Dynamin central region 263 500 IPR000375 -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 838 852 - -
Pvu11g2244 926 ProSiteProfiles GED domain profile. 745 838 IPR020850 -
Pvu11g2244 926 Pfam Dynamin GTPase effector domain 743 825 IPR003130 GO:0003924|GO:0005525
Pvu11g2244 926 PANTHER DYNAMIN-2A 1 857 - -
Pvu11g2244 926 PANTHER DYNAMIN 1 857 IPR022812 -
Pvu11g2244 926 SMART dynamin_3 4 251 IPR001401 GO:0003924|GO:0005525
Pvu11g2244 926 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 68 77 IPR019762 -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 529 547 - -
Pvu11g2244 926 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 39 309 IPR030381 GO:0005525
Pvu11g2244 926 MobiDBLite consensus disorder prediction 635 658 - -
Pvu11g2244 926 SUPERFAMILY PH domain-like 583 706 - -
Pvu11g2244 926 Coils Coil 4 24 - -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 716 736 - -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 513 581 - -
Pvu11g2244 926 Gene3D Dynamin, middle domain 336 561 - -
Pvu11g2244 926 Gene3D Dynamin, middle domain 701 813 - -
Pvu11g2244 926 Pfam PH domain 587 705 IPR001849 -
Pvu11g2244 926 ProSiteProfiles PH domain profile. 582 706 IPR001849 -
Pvu11g2244 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 318 IPR027417 -
Pvu11g2244 926 PRINTS Dynamin signature 42 60 IPR022812 -
Pvu11g2244 926 PRINTS Dynamin signature 67 84 IPR022812 -
Pvu11g2244 926 PRINTS Dynamin signature 179 197 IPR022812 -
Pvu11g2244 926 PRINTS Dynamin signature 198 214 IPR022812 -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 640 657 - -
Pvu11g2244 926 Coils Coil 547 567 - -
Pvu11g2244 926 MobiDBLite consensus disorder prediction 716 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2244 Pvu-Chr11 50142442 50154147 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2244 11 50142442 50154147 Pvu11g2244 11 50142442 50154147 ECH