Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2239 ATGTCTGAAGGCTATTCCTGTGGCTGCTCCGACTCCGACTCTTCCTGCGGCTGTTGGTCTACCGCCGCCACCGCCGCCGCCGCCACCAGATCTGAGGCTTCAACCGAACTCAGACTCTACAGAGCCTTCATCTTCTGTGTCCCCATCTTCTTCACTCTCATTCTCCTCTTTCTCTTCTACCTCTTCTACCTCCGACCACGAACCAGGCTCCATTGGATCACCCACTTTGGTCTTCCCAACAACCTCGACGACCACAACCACAATGCCATCTCCACTGCTGAGTTGGGCTTGAACAAAGAACACAGAGAGATGCTGCCAGTTATTGTCTACAAGGAAAGCTTCTCTGTCAAAGATACCCAATGCTCAGTATGCCTCTTGGACTACCAGTCAGAGGATAGGCTTCAACAGATACCTGCATGTGGCCACACATTTCATATGGGCTGCATTGATCTTTGGCTTGCCACCCACACCACCTGCCCTCTCTGCCGCTTCTCCTTACTAACCATAGCTAAATCTTCGACACAGACATCTGATTTGCAGTCACAGAACAATGAAGAAACACAAGCCGTGGAAGCATCTGAATCAAGATCTACTATGCATATAGAAACCACTGTCCTCCGAAATGTCTCTGGAGAAGTTGCAATCAGCTCTCCCTGCATTGATGTTGAAGGGCAAAATCAGCAAGACAATCAATAA 696 0.4943 MSEGYSCGCSDSDSSCGCWSTAATAAAATRSEASTELRLYRAFIFCVPIFFTLILLFLFYLFYLRPRTRLHWITHFGLPNNLDDHNHNAISTAELGLNKEHREMLPVIVYKESFSVKDTQCSVCLLDYQSEDRLQQIPACGHTFHMGCIDLWLATHTTCPLCRFSLLTIAKSSTQTSDLQSQNNEETQAVEASESRSTMHIETTVLRNVSGEVAISSPCIDVEGQNQQDNQ* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2239 231 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 20 189 - -
Pvu11g2239 231 Pfam Ring finger domain 120 163 IPR001841 -
Pvu11g2239 231 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 20 189 - -
Pvu11g2239 231 SUPERFAMILY RING/U-box 105 169 - -
Pvu11g2239 231 SMART ring_2 121 162 IPR001841 -
Pvu11g2239 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 168 IPR013083 -
Pvu11g2239 231 MobiDBLite consensus disorder prediction 175 197 - -
Pvu11g2239 231 CDD RING-H2_EL5_like 120 163 - -
Pvu11g2239 231 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2239 Pvu-Chr11 50112467 50116453 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2239 11 50112467 50116453 Pvu11g2239 11 50112467 50116453 ECH