Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2238 ATGGAAAGAGAGTTTGAAAGAGGGTATGTGAAGAAGGGGCCATGGAGTAGAGAGGAAGATGAAGTGCTTCTGAGACATGTCAGAAAGTATGGTCCAAGGGAGTGGAGCTCCATTCGATCCAAAGGCTTGTTGCCAAGAACAGGAAAATCTTGTCGCCTTAGATGGGTTAACAAACTTAGACCAAACTTGAAGACTGGATGCAAGTTTACGGCAGAAGAAGAGAGACTGGTGATAGAGTTACAGGCACAGTTTGGGAACAAATGGGCGAAAATTGCAACGTATTTGGCAGGGAGAACGGACAATGATGTGAAAAACTTTTGGAGCAGTAGGAGAAAAAGGTTGGAGAGGATGTTGCAGAAGCCACCAACGTTAAAGCTGCAGAAAAACAAGGGAAAAACTCCTCTTACTCCACTGCTAGTGGATAAGGCTCCTCCATGCAGTTCAAATGAGGTGGAGGAAAACCTTTCTTACCCTACTTCCTACATGGGAAACACTGATGTGTTCGAGATGATCAACCTTCCAGATTTGATAAAGCCAAACTATCCGCAGTTGAAAAATGATTACTTGAGTGCAGTTGAGGTTGAGGCCACCCCACTTCACACAGTACCATCGTTTGAGTCTTCATCGGGGTATAACTTCCCTCTACTCCCTGATCCACTAATGGACTTTCCAGTGTTCCCAGAGTACCAGGACCTTGTTCCAGAGTCCTTTGGTCCAAATTTTATGGAAGGGTTCGAGGAGAATAAATGTTCAGAATGTGTGTGCAGCCAGAAGCTTGAGACTGGGTTGTTGCCAACTCTTGGATTGGAGGAAAATTCTCAAATTACAACTTCAAATGGCTTATTTAAGGACTTCCCAAATGAGATTTTTGAATACTTTGAGCACAATCCAACCCCAACAGAACAATGA 909 0.4389 MEREFERGYVKKGPWSREEDEVLLRHVRKYGPREWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFTAEEERLVIELQAQFGNKWAKIATYLAGRTDNDVKNFWSSRRKRLERMLQKPPTLKLQKNKGKTPLTPLLVDKAPPCSSNEVEENLSYPTSYMGNTDVFEMINLPDLIKPNYPQLKNDYLSAVEVEATPLHTVPSFESSSGYNFPLLPDPLMDFPVFPEYQDLVPESFGPNFMEGFEENKCSECVCSQKLETGLLPTLGLEENSQITTSNGLFKDFPNEIFEYFEHNPTPTEQ* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2238 302 Pfam Myb-like DNA-binding domain 68 108 IPR001005 -
Pvu11g2238 302 Pfam Myb-like DNA-binding domain 15 65 - -
Pvu11g2238 302 Gene3D - 6 65 - -
Pvu11g2238 302 SMART sant 11 61 IPR001005 -
Pvu11g2238 302 SMART sant 65 113 IPR001005 -
Pvu11g2238 302 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Pvu11g2238 302 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Pvu11g2238 302 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Pvu11g2238 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 115 IPR017930 -
Pvu11g2238 302 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 55 IPR017930 -
Pvu11g2238 302 PANTHER TRANSCRIPTION FACTOR DUO1 1 301 - -
Pvu11g2238 302 PANTHER MYB TRANSCRIPTION FACTOR 1 301 - -
Pvu11g2238 302 CDD SANT 68 107 IPR001005 -
Pvu11g2238 302 CDD SANT 14 59 IPR001005 -
Pvu11g2238 302 Gene3D - 67 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2238 Pvu-Chr11 50005901 50007748 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu11g2238 Myb_DNA-bind_6 2.1e-11 CL0123