Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2226 ATGAAACTGGTTGTGGAGGTTATTAATGCTCATGATCTTATGCCAAAAGATGGTGAAGGATCAGCAAGTCCCTTTGTGGAAGTAGACTTTGAAAACCAGCTTAGCCGAACCAGAACTGTCCCAAAGAACCTCAATCCCACTTGGAACCAAAAACTAATCTTCCATTTGGATGCAACCAAACCTTACCATCGCCAAACTATTGAAGTATCTGTCTTCAACGAGAGGAGACTTACTCCAGGCAGAAACTTCCTTGGAAGGGTGAGAATTCCTTGCTCCAACATTGTCAAGGAAGGTGAAGAAGTGTATCAGATTTTCCCACTTGAAAACAAATGGTTTCTCTCACCTGTTAAGGGTGAGATTGGCCTCAAAATATACATTGCATCTGACTCCAACTCCAACTCCAAACCAAAACCTCTTTCTCCTGTTTTTCCTTCAGAAATAGAAAAACTCCCACCTTCTACTCCACTCCAAGCACCAGAATCAACAACTAGTACTACCCTTCCTCCTCCTCGTATCATTCCCTCAGACAGAACAACATCAGAAGCTGGTTCCATTGAAGAACTTCCTACATTTGACACCCCAAAATCTATAGAAGAAGCAGAAGTATACTCTGGTGCACAAGTTATAGATCAAGAGCCAAAGGAAGAAAGCAGAGAAGCTGTGGCAGAGACAACCCAACAACTAAACAAGCACCAAGTTCTCCAGCCACAGATGATTTCCATAAAGAGAAGACCACCAGGTACTCCATCAGTTGATCCTCAAGTCCAATCTAGTCATCATGAAAACTATAATCACAATGACACCAATCCACAGCCTAGGATTTCAATAAAGAGACGACCACAAGCTCAAGATTTTCCTTTCACAATGCACTCTGTTGATCCACAAGTCCAACCAAGCTACGTTGAAGGCTACAATCATAATGACACCAACCAGAAGCCAAGAATTTCAATCAAGAGACGACCACGAGGACCCTTTAATCCACAAGTCCATGCGAGCCATGATGAAGCCTACAACCTCATGGGAACCAACCCACAACAGCCAAGAATTTTAGTAGAGAGACAACCGCAGAATACTCCACTCACCACGCACCAAGTTAGTCCCCAAGTCCCTACTGGCCTTGATGAAAACTACAATCTCAGTGACACCAATGGAGAACGGTGGCCTAGTGGTGGAGCTTATGGTAGAAGAGGGTGGATGAGTGGTAGTGACAGATTCACTAGTACATTTGACCTTGTTGAGCAGATGTATTATCTGTATGTTCGTGTTGTGAAGGCGAAAGATCTTCCCGCAAGCAGCATGACCTCAAGCTGTGATCCTTATGTGGAAGTGAAGCTGGGAAACTACAGGGGAAGAACAAAGCACTTTGATCATAAACTGAACCCGGAGTGGAATCAAGTGTTTGCTTTCTCCAAAGACCGCATTCAGTCTTCTGTTTTAGAAGTCTTTGTGAAAGATAAAGCAATGGTGGGGAGAGATGACTATCTTGGAAGGGTGGTTTTTGACCTCAATGAGGTTCCAACGAGAGTTCCACCAGATAGTCCACTAGCTCCTCAGTGGTATCGGCTTGAGAACAGGGGTGACATTATGCTAGCAGTTTGGATGGGAACACAAGCTGATGAGGCTTTCTCAGAAGCTTGGCATTCTGATGCTGCCACTGTCTATGGAGAGGGTGTTTTCAACATCAGATCCAAGGTATACATGTCCCCAAAACTGTGGTATCTCAGGGTGAATGTCATTGAAGCTCAAGATGTAATACCGGGTGACAGAAACCGTCTACCTGAGGTTTTTGTGAAAGCTCAAGTGGGGTGCCAAGTACTAACAACCAAGATATGCCCCACCAGAACAACCACCCCATTTTGGAATGAAGATTTGGTTTTTGTAGCATGTGAGCCATTTGAGGAGCAATTAACAATCACTGTGGAGGATCGTGTGCACCCTTCAAAAGATGAGGTGCTTGGGAAGATAAGCCTACCAATGACCCTCTTTGAGAAGCGGTTAGACCAAAGGCCGGTTCATTCGCGCTGGTTCAGTCTAGAGAAATTTGGTTTTGGAATGTTGGAAGGTGATAGAAGAAATGAGCTCAAGTTTTCAAGCAGGATTCACATGAGAGTGTGCCTTGAGGGTGGATACCATGTCCTAGATGAGTCCACATTGTACAGCAGTGATCAAAGACCAACAGCAAGACAACTATGGAAGCAACCTATTGGGATACTTGAAGTAGGCATCTTAGGAGCTCAAGGGCTTCTCCCAATGAAGATGAGGGATGGCAGAGGCAGCACAGATGCATACTGTGTTGCCAAGTATGGTCAGAAATGGGTCAGAACAAGAACACTTCTTGACACTTTTAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGAGTTTTTGACAACTGCCATTTAGGTGGAGAAAAATCTACTGGTAGCAACGCTGCTAGAGATTCTCGGATTGGAAAGGTGAGAATAAGGCTATCAACACTTGAAGCTAATAGAATCTACACCAATTCTCACCCTCTTCTTGTTCTACACCCACATGGGGTTAAGAAGATGGGAGAGCTTCAGTTAGCAGTGAGGTTCACAGCACTCTCAGTGGCTAACATGGTTCATATCTATGGCCAACCTTTGCTTCCCAAGATTCATTACTTACATCCTTTCACAGTTAACCAAATAGACAACTTGAGGTACCAAGCAATGAACATTGTGGCTTCGAGGTTAGGCAGAGCCGAACCCCCTCTGAGGAAGGAGGTGGTGGAGTACATGTTGGACGTTGATTCCCATTTGTGGAGCATGAGAAGAAGCAAAGCTAACTTCTTCCGCATCATGTCACTTTTCTCTGGTGTGATCACAATGGGAAAGTGGTTCAGTGATGTTTGCCTCTGGAAGAACCATGTTACATCAATCCTAGTTCACATCCTCTTCCTTATACTCATATGGTACCCCGAATTGATCCTACCAACTGTGTTTCTCTACATGTTCTTGATTGGTCTGTGGAACTACAGGTTTCGGCCAAGACACCCTCCCCACATGGATACCAAACTCTCCTGGGCTGAAGCTGTTCATCCAGACGAACTTGATGAAGAGTTTGACACTTTTCCAACTTCAAGATCACAAGATGTTGTGAGAATGAGGTATGACAGGCTCAGAACTGTGGCAGGAAGGATTCAGACAGTTGTTGGGGACATTGCTACACAAGGGGAGAGGTTTCAGTCTCTACTGAGTTGGAGAGACCCCAGAGCAAGCAGCATCTTTGTGGTGTTTAGCTTTTGTGCTGCTGTGACTCTCTATGCAACACCATTCAGAGTGGTGGCTCTGGTTACAGGCTTGTACTTTCTGAGACATCCAAGGTTTAGGAGCAAGTTGCCTTCAGTAGCAAGTAATTTCTTCAAAAGACTCCCAGCTAGAACAGATAGTTTACTGTGA 3450 0.4461 MKLVVEVINAHDLMPKDGEGSASPFVEVDFENQLSRTRTVPKNLNPTWNQKLIFHLDATKPYHRQTIEVSVFNERRLTPGRNFLGRVRIPCSNIVKEGEEVYQIFPLENKWFLSPVKGEIGLKIYIASDSNSNSKPKPLSPVFPSEIEKLPPSTPLQAPESTTSTTLPPPRIIPSDRTTSEAGSIEELPTFDTPKSIEEAEVYSGAQVIDQEPKEESREAVAETTQQLNKHQVLQPQMISIKRRPPGTPSVDPQVQSSHHENYNHNDTNPQPRISIKRRPQAQDFPFTMHSVDPQVQPSYVEGYNHNDTNQKPRISIKRRPRGPFNPQVHASHDEAYNLMGTNPQQPRILVERQPQNTPLTTHQVSPQVPTGLDENYNLSDTNGERWPSGGAYGRRGWMSGSDRFTSTFDLVEQMYYLYVRVVKAKDLPASSMTSSCDPYVEVKLGNYRGRTKHFDHKLNPEWNQVFAFSKDRIQSSVLEVFVKDKAMVGRDDYLGRVVFDLNEVPTRVPPDSPLAPQWYRLENRGDIMLAVWMGTQADEAFSEAWHSDAATVYGEGVFNIRSKVYMSPKLWYLRVNVIEAQDVIPGDRNRLPEVFVKAQVGCQVLTTKICPTRTTTPFWNEDLVFVACEPFEEQLTITVEDRVHPSKDEVLGKISLPMTLFEKRLDQRPVHSRWFSLEKFGFGMLEGDRRNELKFSSRIHMRVCLEGGYHVLDESTLYSSDQRPTARQLWKQPIGILEVGILGAQGLLPMKMRDGRGSTDAYCVAKYGQKWVRTRTLLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGEKSTGSNAARDSRIGKVRIRLSTLEANRIYTNSHPLLVLHPHGVKKMGELQLAVRFTALSVANMVHIYGQPLLPKIHYLHPFTVNQIDNLRYQAMNIVASRLGRAEPPLRKEVVEYMLDVDSHLWSMRRSKANFFRIMSLFSGVITMGKWFSDVCLWKNHVTSILVHILFLILIWYPELILPTVFLYMFLIGLWNYRFRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSRSQDVVRMRYDRLRTVAGRIQTVVGDIATQGERFQSLLSWRDPRASSIFVVFSFCAAVTLYATPFRVVALVTGLYFLRHPRFRSKLPSVASNFFKRLPARTDSLL* 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2226 1149 CDD C2D_MCTP_PRT_plant 737 866 - -
Pvu11g2226 1149 Gene3D C2 domain 1 140 IPR035892 -
Pvu11g2226 1149 MobiDBLite consensus disorder prediction 298 322 - -
Pvu11g2226 1149 CDD C2A_MCTP_PRT_plant 2 128 - -
Pvu11g2226 1149 Gene3D C2 domain 711 870 IPR035892 -
Pvu11g2226 1149 ProSiteProfiles C2 domain profile. 399 520 IPR000008 -
Pvu11g2226 1149 Gene3D C2 domain 560 704 IPR035892 -
Pvu11g2226 1149 Gene3D C2 domain 403 534 IPR035892 -
Pvu11g2226 1149 CDD C2B_MCTP_PRT_plant 417 536 - -
Pvu11g2226 1149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 128 IPR035892 -
Pvu11g2226 1149 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 367 1149 - -
Pvu11g2226 1149 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 3 112 - -
Pvu11g2226 1149 MobiDBLite consensus disorder prediction 360 388 - -
Pvu11g2226 1149 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 367 1149 - -
Pvu11g2226 1149 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 3 112 - -
Pvu11g2226 1149 Pfam Plant phosphoribosyltransferase C-terminal 994 1149 IPR013583 -
Pvu11g2226 1149 MobiDBLite consensus disorder prediction 131 276 - -
Pvu11g2226 1149 MobiDBLite consensus disorder prediction 360 385 - -
Pvu11g2226 1149 ProSiteProfiles C2 domain profile. 719 847 IPR000008 -
Pvu11g2226 1149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 572 727 IPR035892 -
Pvu11g2226 1149 MobiDBLite consensus disorder prediction 222 236 - -
Pvu11g2226 1149 Pfam C2 domain 417 520 IPR000008 -
Pvu11g2226 1149 Pfam C2 domain 736 849 IPR000008 -
Pvu11g2226 1149 Pfam C2 domain 572 678 IPR000008 -
Pvu11g2226 1149 Pfam C2 domain 2 106 IPR000008 -
Pvu11g2226 1149 MobiDBLite consensus disorder prediction 250 276 - -
Pvu11g2226 1149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 736 871 IPR035892 -
Pvu11g2226 1149 MobiDBLite consensus disorder prediction 155 186 - -
Pvu11g2226 1149 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Pvu11g2226 1149 ProSiteProfiles C2 domain profile. 555 676 IPR000008 -
Pvu11g2226 1149 CDD C2C_MCTP_PRT_plant 573 725 - -
Pvu11g2226 1149 SMART C2_3c 573 673 IPR000008 -
Pvu11g2226 1149 SMART C2_3c 737 846 IPR000008 -
Pvu11g2226 1149 SMART C2_3c 2 103 IPR000008 -
Pvu11g2226 1149 SMART C2_3c 417 514 IPR000008 -
Pvu11g2226 1149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 416 550 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2226 Pvu-Chr11 49927603 49931175 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2226 11 49927603 49931175 Pvu11g2226 11 49927603 49931175 ECH