Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu11g2218 | ATGAATGATGGTAGACAAATGGGGTTGCATTATGTAGACGCAGGGTTTCCTTATGCTGTGAATGAAAACTTCGTGGATTTCTTTCAAGGATTCACTCATGTACCCGTCAATTATGCCTTTGCTGGCTCAATGCCTGATCAGGAAAGTGTCTACTGGTCAATGAACATGAATCCTTATAAGTTTGGATTGTCTGGCCCTGGTAGTACATCTTACTATAGTTCTTATGAGGTAAATGGTCATTTGCCGAGAATGGAGATTGATAGGGCTGAGTGGGAATACCCTTCCACAATTACCTCTGTGGAACCTGCTACAACAGATTCTCCACCAAGAAGAGATGGAGTCACCAGCATTCAGACCATCCCTGAAGAATGCAGTCCAAATCATCTTGAGTCCAATAGTAGTAGCCAGGTCATATGGCAAGACAATATCGATCCTGATAATATGACTTATGAGGAACTACTGGATTTGGGAGAGGCAGTTGGGACTCAGAGCCGAGGTCTTTCACAAGAACTTATTGATATGCTTCCAACCTCGAAGTACAAATTTGGTAGCTTATTCAAAAGAAAAAATTCTGGGAAAAGGTGTGTAATTTGTCAGATGACATACAGAAGAGGAGACCAGCAAATGAAATTGCCATGCAGCCATGTGTATCATAGTGAATGCATCACCAAGTGGCTCAGCATTAACAAGAAATGTCCTGTGTGCAACACTGAGGTTTTTGGCGAGGAATCAACGCATTAG | 741 | 0.4224 | MNDGRQMGLHYVDAGFPYAVNENFVDFFQGFTHVPVNYAFAGSMPDQESVYWSMNMNPYKFGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITSVEPATTDSPPRRDGVTSIQTIPEECSPNHLESNSSSQVIWQDNIDPDNMTYEELLDLGEAVGTQSRGLSQELIDMLPTSKYKFGSLFKRKNSGKRCVICQMTYRRGDQQMKLPCSHVYHSECITKWLSINKKCPVCNTEVFGEESTH* | 247 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu11g2218 | 246 | SUPERFAMILY | RING/U-box | 194 | 240 | - | - | |
| Pvu11g2218 | 246 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 157 | 240 | IPR013083 | - | |
| Pvu11g2218 | 246 | ProSiteProfiles | Zinc finger RING-type profile. | 195 | 236 | IPR001841 | - | |
| Pvu11g2218 | 246 | SMART | ring_2 | 195 | 235 | IPR001841 | - | |
| Pvu11g2218 | 246 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 246 | IPR033276 | GO:0004842|GO:0016567|GO:0046621 | |
| Pvu11g2218 | 246 | Pfam | Ring finger domain | 194 | 236 | IPR001841 | - | |
| Pvu11g2218 | 246 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER | 1 | 246 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu11g2218 | Pvu-Chr11 | 49775939 | 49781917 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu5g1529 | 5 | 37581715 | 37586245 | Pvu11g2218 | 11 | 49775939 | 49781917 | ECH | |
| Pvu11g2218 | 11 | 49775939 | 49781917 | Pvu11g2218 | 11 | 49775939 | 49781917 | ECH |