Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2208 ATGGCTCAGAAGGCGCAGAAAAACGACACCGACTTCAAGGTCCCGGAGCCAATCACCCCCTGCGCCACAGCCACCGCCGCCGCAGCAACTTCCATTTCCGAACCATCTAGATTCTTTGACGCTGCAACTCCCGCCACGTCGTCGCGTTCGCCCAAGCGCTCGCTTCCTCTAGAGGACGCTGCGAACGCCGACCGGACGGTGGCATCGGAGCCGAAGCGCGCGGTGAACCGGTGCTCGGGATGCCGGCGGCGCGTCGGGCTGACCGGATTCCGCTGTCGGTGCGGTGACCTTTTCTGCGCTGAGCACCGGTACACGGACCGCCACGACTGCTCCTACGACTACAAGACCGTCGGGAGAGAGGCCATCGCGAGGGAGAATCCCGTCGTGAAGGCCGCGAAGATCGTGAAGGTCTGA 414 0.6425 MAQKAQKNDTDFKVPEPITPCATATAAAATSISEPSRFFDAATPATSSRSPKRSLPLEDAANADRTVASEPKRAVNRCSGCRRRVGLTGFRCRCGDLFCAEHRYTDRHDCSYDYKTVGREAIARENPVVKAAKIVKV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2208 137 MobiDBLite consensus disorder prediction 38 53 - -
Pvu11g2208 137 MobiDBLite consensus disorder prediction 38 69 - -
Pvu11g2208 137 SMART AN1_Zf_4 78 115 IPR000058 GO:0008270
Pvu11g2208 137 Pfam AN1-like Zinc finger 78 115 IPR000058 GO:0008270
Pvu11g2208 137 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 137 - -
Pvu11g2208 137 ProSiteProfiles Zinc finger AN1-type profile. 72 118 IPR000058 GO:0008270
Pvu11g2208 137 SUPERFAMILY AN1-like Zinc finger 66 131 IPR035896 -
Pvu11g2208 137 Gene3D - 47 133 IPR035896 -
Pvu11g2208 137 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2208 Pvu-Chr11 49712718 49713686 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0378 5 3477914 3480613 Pvu11g2208 11 49712718 49713686 ECH
Pvu11g2208 11 49712718 49713686 Pvu11g2208 11 49712718 49713686 ECH