Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2206 ATGGCTTCTTCCTTCTCCTTCTTCTTCCTAATGTTGCTTCCCCTCGCCGTTATCTCCGCCGTCACCCCCTGCCCGCCCTCACAACGGGCAGCACTCTTGGCCTTCAAAGCTGCCCTGACCGAACCCTACTTGGGCATCTTCAACACATGGAACACCACTGACTGCTGCGCGAGCTGGTACGGCATCGCCTGCGACCCCACCACCGGCCACGTCACCGACGTCAACCTCCGCGGCGAGTCCCAGGACCCAATGTTCCAGAAACTCGGCCTCTCCGGCTACATGACCGGAAAAATCTCGCCGGAAATTTGCACACTGAGCAACCTCACCTCCCTCGTGGTTGCCGACTGGAAGGCGATCTCTGGCGAGATCCCTGCCTGCGTCACATCACTCTCCTCCCTTCGACTTCTGGACCTCGCCGGAAACCGGATCGCCGGCGAGATTCCAACTGAAATCGGAAATATGAGGAGCCTGAGTGTAGTGAGTCTCGCCGACAATGAGATCTCCGGCGAGATTCCGACGTCGATTGTGAACCTCCGCAGACTCATGCATCTTGACCTGAGCAATAACCAGGTCTCCGGCGAGATACCGTATGATTTCGGGAAGCTCCGAATGTTGAGTCGGGCATTGCTGAGTGGGAACCAATTAACCGGGTCAATACCCAAATCCATATCCAGAATGAAACGGCTTGCGGATTTGGATGTGTCGTTGAACCGGTTAACCGGGTCGATACCGGCTGAGCTGGGAAAAATGAAGGTTCTCTCTACTTTGAAATTGGATGGTAACTCCATGACGGGTCCGGTTCCTTCCACTTTGTTGAGAAATACGGGTATGGGCATTTTGAACCTTAGCCGAAACGGGTTTTCGGGGACCATACCCGATGTTTTTGGGGCGGGTTCTTATTTCATGGTTCTTGACTTGTCCTTCAACAACTTCTCGGGTCGGATACCCGCTTCGTTATCCGCGTCTAAGTTTATGGGGCATTTGGATTTGAGCAACAACCACTTATGTGGAGCCATCCCAATCGGGTCTTCCTTTGAACATATCGATGCGGCGTCGTTCAGCAACAATGATTGTTTGTGTGGAAACCCGTTGAAGGCTTGTTGA 1104 0.5353 MASSFSFFFLMLLPLAVISAVTPCPPSQRAALLAFKAALTEPYLGIFNTWNTTDCCASWYGIACDPTTGHVTDVNLRGESQDPMFQKLGLSGYMTGKISPEICTLSNLTSLVVADWKAISGEIPACVTSLSSLRLLDLAGNRIAGEIPTEIGNMRSLSVVSLADNEISGEIPTSIVNLRRLMHLDLSNNQVSGEIPYDFGKLRMLSRALLSGNQLTGSIPKSISRMKRLADLDVSLNRLTGSIPAELGKMKVLSTLKLDGNSMTGPVPSTLLRNTGMGILNLSRNGFSGTIPDVFGAGSYFMVLDLSFNNFSGRIPASLSASKFMGHLDLSNNHLCGAIPIGSSFEHIDAASFSNNDCLCGNPLKAC* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2206 367 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Pvu11g2206 367 PANTHER DNA-DAMAGE-REPAIR/TOLERATION DRT100-LIKE PROTEIN 1 367 - -
Pvu11g2206 367 Pfam Leucine rich repeat 132 190 IPR001611 GO:0005515
Pvu11g2206 367 Gene3D Ribonuclease Inhibitor 207 276 IPR032675 -
Pvu11g2206 367 Gene3D Ribonuclease Inhibitor 277 367 IPR032675 -
Pvu11g2206 367 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 1 367 - -
Pvu11g2206 367 Gene3D Ribonuclease Inhibitor 23 206 IPR032675 -
Pvu11g2206 367 SUPERFAMILY L domain-like 23 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2206 Pvu-Chr11 49695779 49697294 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1539 5 37670435 37672198 Pvu11g2206 11 49695779 49697294 ECH
Pvu11g2206 11 49695779 49697294 Pvu11g2206 11 49695779 49697294 ECH