Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2203 ATGGAGAACAACAATGGCACTTCCCATAACAACAACAAAAGAATTCCATTCTTGGTTTTCTTCAAAGATGCAAGACTTATCTTCAAGCTGGATGCACTTTCTAGAGAGATACTGGGAATTGCATTCCCTGCTGCACTTGCTGTTGTTGCTGATCCCATTGCTTCTTTGATAGACACAACCTTCATTGGCCACTTGGGACCAGTAGAACTTGCTGCTGCTGGAGTTGCCATTGCTTTGTTCAACCAAGCTTCAAGAATCACCATATTTCCTCTTGTTAGTATTACAACTTCCTTTGTGGCTGAGGAAGATACCATCCAAAACATGAACACCAAAAAAACTGAAAATGATGACACTAAGCTCAAGCAAGCAACTGTGTCTAAGGATCATATGGTTCCAGATATAGAAAATGTTGAAGCTCCAAAACAAGTAACAGATGAATCAAACAATGTTGTAGCAAAGATTGTTACAGGGAGCATGGACACAAATAATGAAAATGAAAAAGTTATGACTAAGAGGAAGCAAAAAGTTGGGAAGAAGATAATTGCTTCTGCATCAACGGCCTTGCTTTTTGGAACAATCCTTGGCCTCCTTCAAACTGCAATCCTTTCATTTGCTGCAAAACCTCTTCTATATGCAATGGGTCTAAAACATGATTCTCCAATGCTAGATCCAGCAGAGAAGTACCTAAGATTAAGATCAATTGGTTCTCCTGCTGTTCTTCTTTCCTTGGCCATGCAAGGAATCTTTAGAGGTTTCAAAGACACAACAACTCCTTTATATGTCATTGTTTCGGGATATGCTTTCAATGTTCTGTTGGACCCAATACTTATCTTTTATATGAAATTGGGCCTGAAAGGTGCAGCCATGGCCCATATCATCTCCCAGTATTTGATGGCAACCACCCTCCTTTTATTGTTAATGAGAAGAGTGCACCTCCTACCTCCAAGCATGAAGGATTTGCAGATTTTCAGATTTCTTAAAAATGGAGGTCTACTTTTGATAAGGGTAGTTTCAGTGACATTTTGTATGACCTTAGCTGCATCATTGGCAGCAAGGTTAGGTCCAATTCCCATGGCTGCATTTCAACCAGGCCTGCAAATCTGGTTGGCTTCATCCCTTCTTGCTGATGGTTTAGCTGTGGCTGTTCAGACAATTCTTGCATCTTCATTTGCTGAGAAAGACTATAAGAAGGCTACTGCTGCTGCAACAAGAACACTGCAAATGACTTTTGTTTTGGGAATTGGACTCTCTTTTGCAGTTGCTGTTGGATTATACTTTGGAGCTGGAATATTTTCCAAAAATGTTACTGTTGTGCAACTCATCAAAATAAGCATGCCGTTTGTTGCAGCCACTCAACCAATCAATGCATTGGCCTTTGTCTTTGATGGAGTCAATTATGGAGCTAATGATTTTGCTTATTCTGCATATTCTTTGGCAAGATGGGAACTGGGACAGGACCATGGTACTATCTTAGAAAAGGACTATGATGTTATAAGAGATGTTATGAAGAAGGAGTAG 1518 0.4005 MENNNGTSHNNNKRIPFLVFFKDARLIFKLDALSREILGIAFPAALAVVADPIASLIDTTFIGHLGPVELAAAGVAIALFNQASRITIFPLVSITTSFVAEEDTIQNMNTKKTENDDTKLKQATVSKDHMVPDIENVEAPKQVTDESNNVVAKIVTGSMDTNNENEKVMTKRKQKVGKKIIASASTALLFGTILGLLQTAILSFAAKPLLYAMGLKHDSPMLDPAEKYLRLRSIGSPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYAFNVLLDPILIFYMKLGLKGAAMAHIISQYLMATTLLLLLMRRVHLLPPSMKDLQIFRFLKNGGLLLIRVVSVTFCMTLAASLAARLGPIPMAAFQPGLQIWLASSLLADGLAVAVQTILASSFAEKDYKKATAAATRTLQMTFVLGIGLSFAVAVGLYFGAGIFSKNVTVVQLIKISMPFVAATQPINALAFVFDGVNYGANDFAYSAYSLARWELGQDHGTILEKDYDVIRDVMKKE* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2203 505 PANTHER PROTEIN DETOXIFICATION 11 479 - -
Pvu11g2203 505 TIGRFAM matE: MATE efflux family protein 43 478 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu11g2203 505 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 11 479 IPR044644 -
Pvu11g2203 505 CDD MATE_DinF_like 35 479 IPR044644 -
Pvu11g2203 505 Pfam MatE 182 275 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pvu11g2203 505 Pfam MatE 334 477 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2203 Pvu-Chr11 49577525 49585415 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0229 5 1934196 1942723 Pvu11g2203 11 49577525 49585415 ECH
Pvu11g2203 11 49577525 49585415 Pvu11g2203 11 49577525 49585415 ECH
Pvu11g2203 11 49577525 49585415 Pvu5g0229 5 1934196 1942723 PCT