Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2192 ATGGCGGAGCAAGGCAGCGCCGCCGTCAACAACGGCGAAACAGAACCGCAACAAAACGAACACCACCTCCTCAACAACCACACCGACAACAACGAGGTAGACAATGACGAGAAGAGTTCAGATCCAGAGTTGTTCTGCTGTTTGCTTCAGCCAGTCACCGCCGACGCCGATCCCGAGTACATTGGCGTTCGCCGCCTCCTCCTTCTTCGGAAGGCGGAGGCTGGAATTATCCGCCGCAGAGATTGGAGATGCAATGAGAAAACTTATGTGGCATACCGGAATTACATGAGTAGGTCTAAAAACTGGGAAAGGGATAGTTCGCGAGCCCCTAGTCTGCAGAGTACTCCAGGAAACAGTGGCCGATTTTTTCCATCTCCAACTCCACACTCCCGTTGGTCTGAGGTGGATAGCTTGAGTTCTGGGAGGGATCTGCAAAATGCAAATCCAGTACATAATCATAGATTGAGTTTTGGCTCAAGTGTAAGTGATTCTGATCATCCTAGACACCGTGGGGCTGAGTCTGCTTATTCTTTTGTTGGAATGCATTGTATCTTTGACAAGTGCAAAGCCTCTGTTACCGTGTTGAAGTTTGGGCACATGAGTTCTGATCTACTTGGTTATGGGGCATCTGATGGAACCTTGACTGTCTGCAGTGTATCAGAGAATCCTTCAGTCATCAAACAACTGGATGGGCATTCCAAAGATGTAACAGATTTTGATTTTACATCAAATAATCAATACATTGCATCGTCTTCATTGGATAAAACTGTGAGAGTATGGGAGATAGCGAAAGGTATTTGCATACGGGTGATATATGGAGTATCTCCACAATTGTGTATCCGTTTTCACCCTGTAAATAATAACTTCCTTTCAGTTGGAAATGCAAACAAAGAAATCAACGTGTTCAATTTTAGTACCGGAAGGGTAATTAATAAATCACTATTTGACAGTGAAGTTACCTCTTTGGACCATGACCATACAGGACTTCTCATATTTTGTGGAGATGGACAGGGATGTATATACTCAGTAAATATGAACTCTCACACCGGTGTATTATCTCGCTCGCATCGTTATCGAAGTAGTAGCAAGCAAAAATCTCCTGTTACCACAGTGCAGTATAGGAGTTTCTCTCTGCTCGCTCGTGGACCTGTGTTGTTGACATGTACCCAGGATGGAAACCTGTCTTTCTTCAGTGTGGCTTTGGAGATAAATGGCTATTTAACTCTTCGATGCTCTCTAAAATTAGCTCCACGTATACACAAAATTCAAGCTTCTTTCTGTCCTCTCCTTTCCCTTGAAAAAGGAGAATTCATAGTTGCTGGAAGTGAGGACTCAAATGTCTACTTTTATGATTTAACTCGGCCCAAAAATACATGTGTGAACAAGCTACAGGGTCATCGATTTCCTGTGATGGGTATTGCCTGGAACCATGGAGAAAATTTATTGGCTTCATCTGATTTTTATGGCGTAGTAATTGTGTGGAAGAGAGAAAGAACAAATCAAAACAAATATACACAACAATAG 1524 0.4324 MAEQGSAAVNNGETEPQQNEHHLLNNHTDNNEVDNDEKSSDPELFCCLLQPVTADADPEYIGVRRLLLLRKAEAGIIRRRDWRCNEKTYVAYRNYMSRSKNWERDSSRAPSLQSTPGNSGRFFPSPTPHSRWSEVDSLSSGRDLQNANPVHNHRLSFGSSVSDSDHPRHRGAESAYSFVGMHCIFDKCKASVTVLKFGHMSSDLLGYGASDGTLTVCSVSENPSVIKQLDGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKGICIRVIYGVSPQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSLFDSEVTSLDHDHTGLLIFCGDGQGCIYSVNMNSHTGVLSRSHRYRSSSKQKSPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEINGYLTLRCSLKLAPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTRPKNTCVNKLQGHRFPVMGIAWNHGENLLASSDFYGVVIVWKRERTNQNKYTQQ* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2192 507 MobiDBLite consensus disorder prediction 1 40 - -
Pvu11g2192 507 ProSitePatterns Trp-Asp (WD) repeats signature. 248 262 IPR019775 -
Pvu11g2192 507 Gene3D - 418 506 IPR015943 GO:0005515
Pvu11g2192 507 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 229 262 - -
Pvu11g2192 507 SUPERFAMILY WD40 repeat-like 184 495 IPR036322 GO:0005515
Pvu11g2192 507 MobiDBLite consensus disorder prediction 1 19 - -
Pvu11g2192 507 PANTHER WD REPEAT PROTEIN 26-RELATED 25 499 - -
Pvu11g2192 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 463 495 IPR001680 GO:0005515
Pvu11g2192 507 SMART WD40_4 306 344 IPR001680 GO:0005515
Pvu11g2192 507 SMART WD40_4 415 451 IPR001680 GO:0005515
Pvu11g2192 507 SMART WD40_4 222 261 IPR001680 GO:0005515
Pvu11g2192 507 SMART WD40_4 264 303 IPR001680 GO:0005515
Pvu11g2192 507 SMART WD40_4 178 218 IPR001680 GO:0005515
Pvu11g2192 507 SMART WD40_4 456 495 IPR001680 GO:0005515
Pvu11g2192 507 SMART WD40_4 364 398 IPR001680 GO:0005515
Pvu11g2192 507 Pfam WD domain, G-beta repeat 226 260 IPR001680 GO:0005515
Pvu11g2192 507 Pfam WD domain, G-beta repeat 458 495 IPR001680 GO:0005515
Pvu11g2192 507 Gene3D - 180 408 IPR015943 GO:0005515
Pvu11g2192 507 PANTHER WD REPEAT-CONTAINING PROTEIN 13 25 499 - -
Pvu11g2192 507 MobiDBLite consensus disorder prediction 106 145 - -
Pvu11g2192 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 229 270 IPR001680 GO:0005515
Pvu11g2192 507 MobiDBLite consensus disorder prediction 100 145 - -
Pvu11g2192 507 MobiDBLite consensus disorder prediction 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2192 Pvu-Chr11 49363307 49370456 Transposed