Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2190 ATGGCTTCTCCTCCTTTTTCTTACGCCGTTGTAAAGGATGCAAAAGTGCTTATGGTTGGTGCTGGTGGAATTGGCTGCGAGCTTCTCAAGACTCTCGCTCTCTCCGGCTTTCCTGACATTCACATCATTGACATGGATACTATAGAAGTCAGTAACCTGAATAGACAATTTTTATTTCGACAATCTCATGTTGGGCAATCTAAAGCTAAAGTTGCTAGGGATGCTGTGTTAAAATTTAGGCCCCACATAGATATTACACCATACCATGCAAATGTCAAAGATCCTGAATTCAATGTGGACTTCTTTAAGCAATTTAATGTTGTTCTAAATGGACTTGACAATCTAGATGCACGCCGGCATGTGAATCGCTTGTGCCTGGCAGCTAATGTTCCTTTGGTTGAAAGTGGAACTACTGGGTTCCTTGGACAGGTAACTGTACATGTCAAGGGAAGAACAGAGTGCTATGAGTGTCAGCCTAAACCAGCCCCCAAGACATATCCTGTCTGTACTATCACTAGTACCCCATCAAAGTTTGTTCACTGTGTTGTGTGGGCAAAGGACCTACTTTTTGCCAAGTTATTTGGGGATAAGAATCAGGATAATGACTTGAATGTTCGATCAAGTGATGGTGCTAGTTCCTCAGAAAATGTAGATGATGTATTTGAACGCAGGAAAGATGAAGACATTGATCAATATGGAAGGAAAATTTTTGATCATGTATTTGGGTATAATATCGAATTGGCCTTGTCTAATGAAGAGACATGGAAAAATCGTAATAGACCAAAGCCTATATACAGCAAGGATGTTCTGTCTGATGATCTGGTTCAACAAAATGGAAATTTGGAGAAAAATTGTGCCTGTAATGATGAATTATCAGTATCTGCCATGACATCTTTGGGTATGAAGAATCCACAGGATATTTGGAGTCTCAGAGAAAATTCTAAAATATTTCTTGAAGCATTGCGAATATTTTTTACAAAAAGGGAAAAGGAGATTGGCAATCTAGGATTTGATAAAGATGATCAGTTGGCTGTTGAATTTGTTACTGCAGCTGCTAACATACGGGCTGCTTCCTTTGGCATCCCTCTGCACAGCCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCGACTACAAATGCTGTTATTGCTGGGTTGATTGTCATTGAAGCAATCAAAGTGCTACAAAATGACATTGAAAGTTGTAGAATGACATATTGTCTGGAACATCCATCAAGAAACATGCTGCTTATGCCTGTGGAGCCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCCGAGACACCTTTATCCCTTGAAATAAACACCAACCGTTCAAAGTTGAAAGACTTAGTCGAAAAAATTGTTAAGGCAAAACTAGGGATGAACATTCCTCTAATTATGTGTGCTTCAAACCTCCTTTATGAAGCTGGTGATGTTGAGGACGACATGATTGCCATTTATGAGTCCAACCTTGAAAAGGTCCTAGCTGAGCTTCCTTCACCAGTAACTGGTGGAACAATGCTTACAGTGGAGGATATGCAACAGGAATTTGTTTGCAATATTAACATCAAACACAGAGAGGAGTTTGATGAAGAGAAAGAACCTGATGAGATGGTTCTCTCAGGATGGATTCAACCAGTGTCAGCAGCAGAAAACAAAGACAAATCTGTTGGCAATGGTGGAAGCACCTCAGATGCAGCAGTAACAGCTGTGGAATCTGAGAAGGATGATGAGATAACTATAGTTTCAACCTTGAAGAAGCGAAAGCTTCCCGATGAAACCGACATTTCAAGCGCCACCACCGCCGATGCCGACACAAAGCATCAAAAGCAGTTGGAAGTAATCGACGACGAAGACGATCTTGTGATGCTTGATGGGGATTTAGACAGCTTTAAAAAGAGAAGATTGTCATAG 1929 0.4044 MASPPFSYAVVKDAKVLMVGAGGIGCELLKTLALSGFPDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPHIDITPYHANVKDPEFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAANVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCVVWAKDLLFAKLFGDKNQDNDLNVRSSDGASSSENVDDVFERRKDEDIDQYGRKIFDHVFGYNIELALSNEETWKNRNRPKPIYSKDVLSDDLVQQNGNLEKNCACNDELSVSAMTSLGMKNPQDIWSLRENSKIFLEALRIFFTKREKEIGNLGFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQNDIESCRMTYCLEHPSRNMLLMPVEPFEPNKSCYVCSETPLSLEINTNRSKLKDLVEKIVKAKLGMNIPLIMCASNLLYEAGDVEDDMIAIYESNLEKVLAELPSPVTGGTMLTVEDMQQEFVCNINIKHREEFDEEKEPDEMVLSGWIQPVSAAENKDKSVGNGGSTSDAAVTAVESEKDDEITIVSTLKKRKLPDETDISSATTADADTKHQKQLEVIDDEDDLVMLDGDLDSFKKRRLS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2190 642 MobiDBLite consensus disorder prediction 595 616 - -
Pvu11g2190 642 PIRSF SUMO_E1B 5 625 IPR030661 GO:0016925|GO:0019948
Pvu11g2190 642 MobiDBLite consensus disorder prediction 560 574 - -
Pvu11g2190 642 CDD Uba2_SUMO 15 436 - -
Pvu11g2190 642 Gene3D - 437 630 - -
Pvu11g2190 642 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 443 534 IPR028077 -
Pvu11g2190 642 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 164 375 IPR023318 -
Pvu11g2190 642 Gene3D - 8 109 IPR042449 -
Pvu11g2190 642 Pfam Ubiquitin-activating enzyme, SCCH domain 318 370 IPR019572 -
Pvu11g2190 642 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 10 556 - -
Pvu11g2190 642 MobiDBLite consensus disorder prediction 556 578 - -
Pvu11g2190 642 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 10 556 IPR045886 -
Pvu11g2190 642 Pfam ThiF family 11 434 IPR000594 -
Pvu11g2190 642 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 11 483 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2190 Pvu-Chr11 49343732 49350804 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2190 11 49343732 49350804 Pvu11g2190 11 49343732 49350804 ECH