Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2187 ATGGGTGCCGTTTGTTGTGTTGCTGCCAAAGACAAAACTTTACAAAGTGCATCACCCAGTGAAATCATGCATCGGAATATTCGATATTCTCCGACGTGGAACTTTAGGTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACTGCTGTAACTTGGTTTTCTAATGGTATTAGCAGGAATGATGGATTGGAGAATAAAAATGAACCCTCTTATGTATCCGAGGATGGAAGCCCGTTGCAGAATTATCAAAGGAGTAGATCCCAAAAATCCCCAGTCTCAGAAGGAACTGCTAGGAACCTGATAAATTCATCTTCAGATCAAACTATTTCAAGGAATGTCTTGACAAATGAGAGCGTGGAACAGGCGAAGAGGTTGGCTGAATCATCAACAATATCATGCCCGTATCCCACAAAACCCCTACATTCATTGCCTTCTACTTCATCAGTATCACCTCAGCCATACGATAGTCACCCATTTCCATCCAGCTCAACCACTTCAAGGTGGGCTTGCCATTCCACAGGAGAGCAACTATCTTGTCAAGTTTCTGATAGCCAAATCTTTGGATATAAGACGCCTAGCAACTCTTATGTATCTGAAGAGAGGCCAGTGTTTCCTTCGTGGAGCAATGAATCTGGTATGCACTCCCATGGTGGGTCTTCAGGTAATTGGTCTAGGTCTGGCTTTTCTGAGCTGACAGGCAGTTCCCTCAAAGAAAGATGGTCATTTGATAGTGAGTCATTTGGTTTCAATTGTGAAAGGCTGGTTAGATCCAGTAGTCAGTTTTCAAATTCTCCAGTTGATTTCCAAGCATGTGGTGTTTGCTCAAAACTTTTAACTGAGAAATCTTCTTGGGGGTCCCAAAAGATAATTGCTAGTAATGACCTTTCTGTAGTTTCTGTCCTTATTTGTGGGCATGTTTATCATGCTGAATGCTTGGAGAGTTTGACACCTGAAGTCAACAAGTACGATCCACTTTGTCCAGTTTGCACTTTTGGTGAGAAATATACTCTTAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATGGATTTGAAGGCTAAAAATAAGAAATCAAGGAACCAAATTGTGGACAGTGATATTGACGATAATTCTGTTGCGCACGAACATTTTAGAGAAAAATGGCGTCAAGCTAGTAAAGGTCTTGGAATTGATTCTAGTTCTAGTGGGAGAAGCTCTAATGGGAAACCTTTTCTTAAGAGACATTTCTCATTTGGCACAAGGAGTTCCAAATCCATGCTAGATAATCAGTCAACCCCGAAGAAAGGCTTCTTTTGGGCAAAATCTAGTAGAGAATAA 1314 0.4148 MGAVCCVAAKDKTLQSASPSEIMHRNIRYSPTWNFRWDHRGRVAGEDTAVTWFSNGISRNDGLENKNEPSYVSEDGSPLQNYQRSRSQKSPVSEGTARNLINSSSDQTISRNVLTNESVEQAKRLAESSTISCPYPTKPLHSLPSTSSVSPQPYDSHPFPSSSTTSRWACHSTGEQLSCQVSDSQIFGYKTPSNSYVSEERPVFPSWSNESGMHSHGGSSGNWSRSGFSELTGSSLKERWSFDSESFGFNCERLVRSSSQFSNSPVDFQACGVCSKLLTEKSSWGSQKIIASNDLSVVSVLICGHVYHAECLESLTPEVNKYDPLCPVCTFGEKYTLKLSEKALKAEMDLKAKNKKSRNQIVDSDIDDNSVAHEHFREKWRQASKGLGIDSSSSGRSSNGKPFLKRHFSFGTRSSKSMLDNQSTPKKGFFWAKSSRE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2187 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 331 IPR013083 -
Pvu11g2187 437 MobiDBLite consensus disorder prediction 57 98 - -
Pvu11g2187 437 MobiDBLite consensus disorder prediction 130 167 - -
Pvu11g2187 437 SMART ring_2 271 329 IPR001841 -
Pvu11g2187 437 PANTHER BNAA09G43140D PROTEIN 1 431 - -
Pvu11g2187 437 ProSiteProfiles Zinc finger RING-type profile. 271 330 IPR001841 -
Pvu11g2187 437 SUPERFAMILY RING/U-box 264 330 - -
Pvu11g2187 437 MobiDBLite consensus disorder prediction 386 437 - -
Pvu11g2187 437 MobiDBLite consensus disorder prediction 386 400 - -
Pvu11g2187 437 MobiDBLite consensus disorder prediction 410 429 - -
Pvu11g2187 437 PANTHER EXPRESSED PROTEIN 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2187 Pvu-Chr11 49240308 49245366 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g2187 11 49240308 49245366 Pvu11g2187 11 49240308 49245366 ECH