Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2174 ATGACCAAAATGTCATGTTTTTTCTCTCTCTTTGTTTTACTCTGTTTTTTCAACATCTCCCTCTCAGAAGCTGGTGGATTCAGTGTGGAGATTTTCCACCGTGATTCACCAGAATCACCGTTCTATAGCTCCTCAGAAACAAAATTCCAAAGGGTATCCAATGCTCTGCGCCGTTCCTTCAACCGTGCCAATCCTTTCAACCAATCCTTAGGGCTTCCAAGCACAGTAAGAGCCATTGTAATACCAGATTTTGGTGAATACGTGATGAGGTATGCAGTTGGAACGCCACCCCTTAAGGTGTTTGGACTTCTTGACACAGGCAGTGACATCATTTGGATGCAATGCATTCCGTGCACAAAGTGTTACCACCAAGCCACTCCTCTGTTCGATCCTTCAAAATCCACAACATACAGAACCCTCCCCTGCAGTTCCAGGATATGCCACACTGTTCTTGATACCTTCTGCAGCAGAAAACATTGCAAATATGATATTACCTATGCAGATGGAACATTCTCCCATGGAGATCTGAGTCAGGAGACCCTTTATTTGAGCTCCACCAATGGAAGACCAGTGCAGCTTCCAGGAATTGCAATAGGGTGTGGTCTTAACAATGGCATGTCCTTCAAAGGTGCAAATTCTGGCATAGTTGGCCTTGGAAGTGGCCCTGCATCCCTTATAAACCAATTGGGTCCTTCAGTTGGTTGGAAGTTTTCTTACTGTTTGGTCCCAGAAACTCTCCATTCCAATGAAACTAGCAGACTCAATTTTGGAGATGCTGCTATTGTTAGTGGAGTTGGAACTGTCTCAACCCCATTGGTTGTTAAACCTAAAGAAGTGTTCTACTTCCTAACCCTAGAGGGATTCAGTGTGGGAGGCAAAAGAGAAGTGTTTGGAGGGTCTTTAGCTGGGCCTGGAAGAGATGGAAATGTGGTGATTGACTCAGGTACAACACTCACTCTTTTGCCTGCTGATGTTTACACATGGTTGCAAAAAGCAGTGGCAGAGGAAGTTAAACTGAAGGCTATTAAGGATCCAAATAACGTGTTGGGACTCTGCTACCCAGGCACATTGAAAAAACTGGTTTTGCCAGTGATCACAGCACACTTCAGAGGTGCAGCAGATGTGGTTTTATATCCCTTGAACACCTTTGTTGAAGTGGCTGATGGAGTTGTGTGCTTGGCTTTTCAGCCATCTCAAACTGGTGCTGTCTTTGGAAACTTGGCTCAGCAAAACCTTTTGGTTGGCTATGATCTGCAAAAGCACACAGTGTCCTTTAAGCAAACAGATTGCACCAAGATGAGATGA 1305 0.4467 MTKMSCFFSLFVLLCFFNISLSEAGGFSVEIFHRDSPESPFYSSSETKFQRVSNALRRSFNRANPFNQSLGLPSTVRAIVIPDFGEYVMRYAVGTPPLKVFGLLDTGSDIIWMQCIPCTKCYHQATPLFDPSKSTTYRTLPCSSRICHTVLDTFCSRKHCKYDITYADGTFSHGDLSQETLYLSSTNGRPVQLPGIAIGCGLNNGMSFKGANSGIVGLGSGPASLINQLGPSVGWKFSYCLVPETLHSNETSRLNFGDAAIVSGVGTVSTPLVVKPKEVFYFLTLEGFSVGGKREVFGGSLAGPGRDGNVVIDSGTTLTLLPADVYTWLQKAVAEEVKLKAIKDPNNVLGLCYPGTLKKLVLPVITAHFRGAADVVLYPLNTFVEVADGVVCLAFQPSQTGAVFGNLAQQNLLVGYDLQKHTVSFKQTDCTKMR* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2174 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 310 321 IPR001969 GO:0004190|GO:0006508
Pvu11g2174 434 PANTHER OS07G0603500 PROTEIN-RELATED 8 431 - -
Pvu11g2174 434 SUPERFAMILY Acid proteases 84 431 IPR021109 -
Pvu11g2174 434 CDD pepsin_A_like_plant 86 430 IPR034161 -
Pvu11g2174 434 Gene3D Acid Proteases 71 258 IPR021109 -
Pvu11g2174 434 Pfam Xylanase inhibitor C-terminal 281 426 IPR032799 -
Pvu11g2174 434 ProSiteProfiles Peptidase family A1 domain profile. 87 426 IPR033121 -
Pvu11g2174 434 Pfam Xylanase inhibitor N-terminal 87 258 IPR032861 -
Pvu11g2174 434 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 8 431 - -
Pvu11g2174 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 102 113 IPR001969 GO:0004190|GO:0006508
Pvu11g2174 434 Gene3D Acid Proteases 265 434 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2174 Pvu-Chr11 49128862 49130273 Dispersed/Tandem