Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2173 ATGTCACATTCATCAACCCTAGTTCTTATTTTACTGTCTCTTTGCAGCATCACTTTCTCAGAGGCTCTGAAAGGAGGGTTCAGTGTGGAAATCATCCACCGTGATTCATCAAAATCACCGTTGCATCGTCCCACAGAAACCCAATTCCAGCGAGTTGCCAATGCAGTGCGTCGTTCCATGAATCGTCCCCATCATTTCAACAGAAGTTCATCACCTAAGCTCAACGTAACACTAAACGATGGTGAATACCTCATCAGCTATTCAGTTGGAACCCCACCCTTCAAAGTTTATGGCATTGCTGACACAGGAAGTGACATGATTTGGTTGCAGTGTAAGCCTTGTGAAATCTGCTACAACCAAACCACTCCAATATTTGATCCTTCAAAATCCAAAACCTACAAAACCCTTCGTTCCTCCTCTTCTGCATGTAAATCAGTGCAAGATGCCTCCAAGGAAGGTGAAAAGTGTGAATATACAATTCACTATGGAGATGGGTCACAGTCACATGGAGATCTCAGTGTGGAGACTCTCACTTTGGACTCCACCAATGGCTCTTCAATTCGGTATCCAAGAACTGTGATAGGATGTGGAAGAAAAAATAGTGTGTCCTTTGAAGGGAAGGGATCTGGGGTAGTTGGCCTTGGAAGAGGACCTGTGTCCTTTATATCTCAATTGGGTTCTTCAATAGGTGGAAAATTTTCCTATTGTTTTGCTCCAATGGCTAATACTTCTAGCAAACTCAATTTTGGAGATGCTGCTGTGGTTTCTGGGAAAGGGAGTGTTTCAACTCCTATAGTGTCGCTTGAGCCAATGGTGTTTTACTACTTAACATTGGAAGCATTCAGTGTTGGGAAAACCAGAATAAAGTTCAGAAACTTTTCATCTGGGTCTAATGGAGAGGGAAACATCATAATTGACTCAGGTACAACACTCACTCTTTTGCCAGGTGATGTTTACAAAAAGCTGGAATCAGCAGTGGCAAGGGAAATTGAATTGGATCGTGTTGAGGATCCATTTAAGCAGTTGAGCCTTTGCTACAAAGGTAAATTTGATGAAGTGCATGCACCAGTGATAACAGCACATTTTAGAGGTGATGCAGATGTGAAGTTGAATGCTGTGAACACCTTTGTTGAGGTGGATGAAGGGGTGGTGTGTTTGGCTTTCATGGCAAGTGAAATTGGTTCCATCTTTGGGAACTTGGCTCAGATAAACTTCTTGGTTGGCTATGACTTGGAAAAGAAAAGAGTCTCCTTCAAACCCACAGACTGTACTAACCACTGA 1281 0.427 MSHSSTLVLILLSLCSITFSEALKGGFSVEIIHRDSSKSPLHRPTETQFQRVANAVRRSMNRPHHFNRSSSPKLNVTLNDGEYLISYSVGTPPFKVYGIADTGSDMIWLQCKPCEICYNQTTPIFDPSKSKTYKTLRSSSSACKSVQDASKEGEKCEYTIHYGDGSQSHGDLSVETLTLDSTNGSSIRYPRTVIGCGRKNSVSFEGKGSGVVGLGRGPVSFISQLGSSIGGKFSYCFAPMANTSSKLNFGDAAVVSGKGSVSTPIVSLEPMVFYYLTLEAFSVGKTRIKFRNFSSGSNGEGNIIIDSGTTLTLLPGDVYKKLESAVAREIELDRVEDPFKQLSLCYKGKFDEVHAPVITAHFRGDADVKLNAVNTFVEVDEGVVCLAFMASEIGSIFGNLAQINFLVGYDLEKKRVSFKPTDCTNH* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2173 426 ProSiteProfiles Peptidase family A1 domain profile. 83 419 IPR033121 -
Pvu11g2173 426 PANTHER OS07G0603500 PROTEIN-RELATED 7 424 - -
Pvu11g2173 426 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 7 424 - -
Pvu11g2173 426 SUPERFAMILY Acid proteases 78 423 IPR021109 -
Pvu11g2173 426 CDD pepsin_A_like_plant 82 423 IPR034161 -
Pvu11g2173 426 Pfam Xylanase inhibitor C-terminal 274 419 IPR032799 -
Pvu11g2173 426 Gene3D Acid Proteases 62 249 IPR021109 -
Pvu11g2173 426 Pfam Xylanase inhibitor N-terminal 83 251 IPR032861 -
Pvu11g2173 426 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 303 314 IPR001969 GO:0004190|GO:0006508
Pvu11g2173 426 Gene3D Acid Proteases 250 426 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2173 Pvu-Chr11 49121276 49122556 Dispersed/Tandem