Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2171 ATGTCACACTATTCATCTCTTGTTCTCCTTTTACTGTGTTTTTGCAGACTCTATTCTTTAGAAGCTCTGAATGGTGGATTCAGTGTGGAGATGATCCACCGTGACTCACCAAAATCACCATTCTATAACTCCACAGAAACTCAGTTCCAAAGAATTTCCAATGCCCTAAGTCGTTCCATTATCCGTGCGAACCATTTCAACAAATCTTTAGTGTCTGCAAACACACCTCAGGCACCAGTAACCTCAGCTAAAGGAGAATATCTAATGAGTTATGAAATTGGAACCCCACCAATCCAAGTCTATGGAATTGTTGATACTGGTAGTGACATTACTTGGCTGCAATGCGAACCATGTCAAACATGTTTCAAGCAAACCACTCCTATCTTTGATCCTTCAAAATCCAAAACATACAAAAACATCAGTTGCAATGCTAAGCCATGCCGTTTTGTACAAGGTACCTGCCCTAAACCCACCACCAGCAGTTGTCAATATTCTATCAGCTATGGTGATGGGTCATACTCAGAGGGAGATCTTAGTTTAGAGACCATTACCTTAAACTCCACAAATGGCTCTCCTTTCAAAATTCCTAGTACTGTAATAGGATGTGCTCAGAACAATCATCTTGCCTTTGAACTAGGAGGTTCTGGCATAGTTGCACTGGGAAATTCACCAGTGTCTCTAGCAAATCAAATGGGTCCATCAATAGGTGGAAAGTTTTCTTATTGCTTGGTGCCAATACTCTCACCACCTAGTATCTCTAGCAAACTCAACTTTGGAAATGCTGCTGTGGTTTCTGGAAGTGGAACCGTCTCAACCCCGTTTTATTCACGAGAGCCTGAGGAATTTTACTACCTGTACTTAGAAGCAATTAGTGTGGGAAGCAAGAGAATAGAGGTTGGAAGCACTTCAGCTAGAGCTGGTGGAAAGGGAAATATTGTGATTGACTCAGGTACAACAGTCACTTTTCTACCAAATGATGCTTACTCAAAGTTGGAATCAGCTGTTGCAAAGGAAGTGAAGTTGCAGCCTGCTAAGGATCCAAACCACGTGTTGAGCCTTTGTTACAAAGCTGCTAAATCTGATAAACTAGATGTGCCAGTGATGACAGCACATTTTACTGGTGCAGATGTGCTTTTGCATGGTTCCAGCACCTTTATGAAAGTGGCTGATGGTGTTGTGTGCTTGGCATTTGTGCCAACTCTAAGTACTCCTATCTTTGGGAACTTGGCTCAGCAAAACGTTTTGGTTGGCTATGATCTTGAGAAGAAAACAGTGTCCTTTAAGCTTGTGGATTGCATTGCACAAAACAATGATTGA 1317 0.4184 MSHYSSLVLLLLCFCRLYSLEALNGGFSVEMIHRDSPKSPFYNSTETQFQRISNALSRSIIRANHFNKSLVSANTPQAPVTSAKGEYLMSYEIGTPPIQVYGIVDTGSDITWLQCEPCQTCFKQTTPIFDPSKSKTYKNISCNAKPCRFVQGTCPKPTTSSCQYSISYGDGSYSEGDLSLETITLNSTNGSPFKIPSTVIGCAQNNHLAFELGGSGIVALGNSPVSLANQMGPSIGGKFSYCLVPILSPPSISSKLNFGNAAVVSGSGTVSTPFYSREPEEFYYLYLEAISVGSKRIEVGSTSARAGGKGNIVIDSGTTVTFLPNDAYSKLESAVAKEVKLQPAKDPNHVLSLCYKAAKSDKLDVPVMTAHFTGADVLLHGSSTFMKVADGVVCLAFVPTLSTPIFGNLAQQNVLVGYDLEKKTVSFKLVDCIAQNND* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2171 438 PANTHER OS07G0603500 PROTEIN-RELATED 2 432 - -
Pvu11g2171 438 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 312 323 IPR001969 GO:0004190|GO:0006508
Pvu11g2171 438 Gene3D Acid Proteases 65 257 IPR021109 -
Pvu11g2171 438 CDD pepsin_A_like_plant 86 432 IPR034161 -
Pvu11g2171 438 Gene3D Acid Proteases 258 437 IPR021109 -
Pvu11g2171 438 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 2 432 - -
Pvu11g2171 438 SUPERFAMILY Acid proteases 82 432 IPR021109 -
Pvu11g2171 438 Pfam Xylanase inhibitor C-terminal 283 428 IPR032799 -
Pvu11g2171 438 Pfam Xylanase inhibitor N-terminal 87 260 IPR032861 -
Pvu11g2171 438 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 102 113 IPR001969 GO:0004190|GO:0006508
Pvu11g2171 438 ProSiteProfiles Peptidase family A1 domain profile. 87 428 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2171 Pvu-Chr11 49114302 49115618 Dispersed/Tandem