Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2169 ATGTCACACTATTCATATCTTGTTTTTGTTTTACTGTGTCTTTGCAATCTCTATTCTTCAGAAGCTCAAAATGGTGGATTCAGTGTGGAGATAATCCACCGTGACTCACCAAAATCACCATTCTATAACTCGACAGAAACTCAATTCCAAAGAATTTCCAATGCCCTAAGTCGTTCCATTATCCGTGTGAGCCATTTCAACAAATCTTTTGTGTCTGCAAACACACCCCAGATACCTGTAACCTCAGCTCATGGAGAATATCTAATGAGATATTCTGTGGGAACCCCACCAGTCCAAGTCTATGGAGTTCTTGATACTGGTAGTGACCTCACTTGGCTGCAATGCCAACCAATGCAAACCTGTTTCAAGCAAATCACTCCAATCTTTGATCCTTCAAAATCAAAAACCTACCAAACCATCAGTTGCACTACTAATACATGTCGTTCTGTGAAAGGTTCCTCTTGCCCTTCACCCACCAGCAATTGTAAATATTATATTAGCTATGCTGATTTGTCATACTCACAAGGAGATCTTAGTTTTGAGACACTTACCTTAGCCTCCACCAATGGCTCACCAGTCAAAATTCCTAGATTTGGAATAGGATGTGGTCATAGCAATTTTCTTTCCTTTAAACGAGGAGGTTGTGGCATAGTTGGCCTAGGAAGTGCACCAATGTCCTTTGTAAATCAATTGGGTCCATCAATTGGTGGAAAGTTTTCTTATTGTTTGGTGCCAATACGTTCACCACCAAGTATATCTAGCAAACTCAACTTTGGAAATGCTGCTGTGGTTTCTGGGCATGGCACTGTTTCAACCCCCTTATATTCACGAAATGGACAACTATTTTACTACCTAAACTTAGAAGCAATCAGTGTGGGAAGCAATAGAATAGAGTTTGAAAGCTCTTCATTACCTAGAGGTGGTGGAAAGGGAAATATCATAATTGACTCAGGCACAACACTCACTTTTCTACCAAATGATGTTTACTCAAAGTTGGAATCAGCTGTTGCAAACGTTGTTAAGATGACACCTGCTAAGGATCCAACTCATTTGCTGAGCCTTTGTTACAAAGTATTTGATAGACCATATGTACCAGTGATCACAGCACATTTTACTGGTGCAAATGTCATTTTATATGATTCCAACACCTTTATGAAAGTGGGTGATAATGTTGTGTGCTTGGCATTTCTGCCAAGTACTAGTGCTATCTTTGGGAACTTGGCTCAGCAAAACATGTTCGTTGGCTATGATCTTCAGAAGAACACAGTGTCCTTTAAGCTTACGGATTGCACGAAACAGTGA 1302 0.4009 MSHYSYLVFVLLCLCNLYSSEAQNGGFSVEIIHRDSPKSPFYNSTETQFQRISNALSRSIIRVSHFNKSFVSANTPQIPVTSAHGEYLMRYSVGTPPVQVYGVLDTGSDLTWLQCQPMQTCFKQITPIFDPSKSKTYQTISCTTNTCRSVKGSSCPSPTSNCKYYISYADLSYSQGDLSFETLTLASTNGSPVKIPRFGIGCGHSNFLSFKRGGCGIVGLGSAPMSFVNQLGPSIGGKFSYCLVPIRSPPSISSKLNFGNAAVVSGHGTVSTPLYSRNGQLFYYLNLEAISVGSNRIEFESSSLPRGGGKGNIIIDSGTTLTFLPNDVYSKLESAVANVVKMTPAKDPTHLLSLCYKVFDRPYVPVITAHFTGANVILYDSNTFMKVGDNVVCLAFLPSTSAIFGNLAQQNMFVGYDLQKNTVSFKLTDCTKQ* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2169 433 CDD pepsin_A_like_plant 86 430 IPR034161 -
Pvu11g2169 433 Gene3D Acid Proteases 258 433 IPR021109 -
Pvu11g2169 433 Pfam Xylanase inhibitor C-terminal 283 426 IPR032799 -
Pvu11g2169 433 PRINTS Pepsin (A1) aspartic protease family signature 93 113 IPR001461 GO:0004190|GO:0006508
Pvu11g2169 433 PRINTS Pepsin (A1) aspartic protease family signature 313 324 IPR001461 GO:0004190|GO:0006508
Pvu11g2169 433 PRINTS Pepsin (A1) aspartic protease family signature 402 417 IPR001461 GO:0004190|GO:0006508
Pvu11g2169 433 PANTHER OS07G0603500 PROTEIN-RELATED 6 431 - -
Pvu11g2169 433 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 6 431 - -
Pvu11g2169 433 SUPERFAMILY Acid proteases 80 430 IPR021109 -
Pvu11g2169 433 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 313 324 IPR001969 GO:0004190|GO:0006508
Pvu11g2169 433 Gene3D Acid Proteases 66 257 IPR021109 -
Pvu11g2169 433 ProSiteProfiles Peptidase family A1 domain profile. 87 426 IPR033121 -
Pvu11g2169 433 Pfam Xylanase inhibitor N-terminal 87 260 IPR032861 -
Pvu11g2169 433 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 102 113 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2169 Pvu-Chr11 49050514 49051815 Tandem