Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g2168 ATGTCACACTATTCATCTCTTGTTTTTGTTTTACTGTGTCTTTGCAATCTCTATTCTTCAGAAGCTCTCAATGGTGGATTCAGTGTGGAGATGATCCACCGTGACTCACCAAAATCACCATTCTATAACTCCACAGAAACTCAGTTCCAAAGAATTTCCAATGCCCTAAGTCGTTCCATTATCCGTGTGAACCATTTCAACAAATCTTTTGTGTCTGCAAACACACCCCAAGCACCAGTAACCTCAGCTCTAGGAGAATATCTAGTGAGTTATGCAATTGGAACCCCACCAATCCAAGCCTTTGGAATTCTTGATACTGGTAGTGACATCACTTGGCTGCAATGCCAACCATGTAAAAGGTGTTTCAAGCAAATCACTCCCATCTTTGATCCTTCAAAATCCAAAACCTTCAACACCATCGGTTGCACTACTAATACATGCCGTTCTGTACAAGGTACCTCTTGCCCTTCATCCACCAGTAGTTGTAAATATTCTCTTAGCTATGCTGATGGGACAAACTCACAAGGAGATCTTAGTTTTGAGACACTTACCTTAGCCTCCACCAATGGCCCTCCTGTCAAAATTCCTAGATTTGAAATAGGATGTGGTCACAACAATTTTGTTTCCTCTGAACGAGGAAATTCTGGCATAGTTGGCCTGGGACGTGCACCAGTGTCCCTTGTGAATCAATTGGGTCCATCAATAGGTGGAAAGTTTTCTTATTGCTTGGTACCAGCACTTTCACCACCTAGTGTATCTAGCAAACTCAATTTTGGAAATGCTGCTGTGGTTTCTGGGCGTGGCACTGTCTCAACCCCTTTATATTCACGAAATAGAGAAGTATTTTACTACCTAAACCTTGAAGCAATTAGTGTGGGAAGGAATAGAATAGAGGTTGGAAGCTCTTTACCTAGGGCTGGTGGAAAGGGAAACATGATTATTGATTCAGGTACAACACTCACTTTTCTACCAAATGATGTTTACTCAAAGTTTGAATCAGCTGTTGCAAAGGAGGTTAAGTTGCAGCCTGCTAAGGATCCAAATCAAGTGTTGAGCCTTTGCTACAAAGCTACATCTGATAAATTTGATGTACCAGTGATCACAGCACATTTTAGTGGTGCAAATGTGCTTTTATTTGGTCTTAACACCTTTACTAGAGTGTCTGATGGTGTTGTGTGTTTGGCATTCCAGCCAAGTCAATCTACTCCTACCTTTGGGAACTTGGCTCAGCAAAACATTTTGGTTGGCTATGATCTTCAGAAGAACACAGTGTCCTTTAAGCTTGTGGATTGCACAAAACAATGA 1305 0.4146 MSHYSSLVFVLLCLCNLYSSEALNGGFSVEMIHRDSPKSPFYNSTETQFQRISNALSRSIIRVNHFNKSFVSANTPQAPVTSALGEYLVSYAIGTPPIQAFGILDTGSDITWLQCQPCKRCFKQITPIFDPSKSKTFNTIGCTTNTCRSVQGTSCPSSTSSCKYSLSYADGTNSQGDLSFETLTLASTNGPPVKIPRFEIGCGHNNFVSSERGNSGIVGLGRAPVSLVNQLGPSIGGKFSYCLVPALSPPSVSSKLNFGNAAVVSGRGTVSTPLYSRNREVFYYLNLEAISVGRNRIEVGSSLPRAGGKGNMIIDSGTTLTFLPNDVYSKFESAVAKEVKLQPAKDPNQVLSLCYKATSDKFDVPVITAHFSGANVLLFGLNTFTRVSDGVVCLAFQPSQSTPTFGNLAQQNILVGYDLQKNTVSFKLVDCTKQ* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g2168 434 CDD pepsin_A_like_plant 86 431 IPR034161 -
Pvu11g2168 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 312 323 IPR001969 GO:0004190|GO:0006508
Pvu11g2168 434 Pfam Xylanase inhibitor C-terminal 283 427 IPR032799 -
Pvu11g2168 434 Gene3D Acid Proteases 66 257 IPR021109 -
Pvu11g2168 434 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 4 432 - -
Pvu11g2168 434 ProSiteProfiles Peptidase family A1 domain profile. 87 427 IPR033121 -
Pvu11g2168 434 Pfam Xylanase inhibitor N-terminal 87 260 IPR032861 -
Pvu11g2168 434 PANTHER OS07G0603500 PROTEIN-RELATED 4 432 - -
Pvu11g2168 434 Gene3D Acid Proteases 258 434 IPR021109 -
Pvu11g2168 434 SUPERFAMILY Acid proteases 83 431 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g2168 Pvu-Chr11 49044841 49046145 Tandem